RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 STRA6Q9BX79 667 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 MRPL4Q9BYD3 311 aaKnown RBP10.77□□□□□ -0.69
CLK3-220ENST00000567992 FGFBP2Q9BYJ0 223 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 TRIM9Q9C026 710 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 TRIM6Q9C030 488 aaPredicted RBP10.77□□□□□ -0.69
CLK3-220ENST00000567992 HAPLN2Q9GZV7 340 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 CDT1Q9H211 546 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 ST6GALNAC4Q9H4F1 302 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 MIOSQ9NXC5 875 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 LMCD1Q9NZU5 365 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 KCNG1Q9UIX4 513 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 KCNH3Q9ULD8 1083 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
CLK3-220ENST00000567992 PLAGL2Q9UPG8 496 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
CLK3-220ENST00000567992 VCANP13611 3396 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 MYO7AQ13402 2215 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 CITO14578 2027 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 A0A1B0GVL5 298 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 A0A1W2PQ27 194 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 A0A1W2PQ64 194 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 A0A1W2PQD8 194 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 H0YCG3 227 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 PTGESO14684 152 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 MEFVO15553 781 aaPredicted RBP10.76□□□□□ -0.69
CLK3-220ENST00000567992 RECQL4O94761 1208 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 DDHD2O94830 711 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 PIGRP01833 764 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 SCNN1GP51170 649 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 GTF2BQ00403 316 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 DSC1Q08554 894 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 SLC39A4Q6P5W5 647 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 KCNT2Q6UVM3 1135 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 ZPBP2Q6X784 338 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 MAP4K3Q8IVH8 894 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 SLC39A11Q8N1S5 342 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 CEP120Q8N960 986 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 SPPL3Q8TCT6 385 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 BCL7CQ8WUZ0 217 aaPredicted RBP10.76□□□□□ -0.69
CLK3-220ENST00000567992 MRPL38Q96DV4 380 aaKnown RBP10.76□□□□□ -0.69
CLK3-220ENST00000567992 ZBTB45Q96K62 511 aaPredicted RBP10.76□□□□□ -0.69
CLK3-220ENST00000567992 GOLPH3LQ9H4A5 285 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 ZHX3Q9H4I2 956 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 NRDE2Q9H7Z3 1164 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 MAGEF1Q9HAY2 307 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 ALG13Q9NP73 1137 aaKnown RBP10.76□□□□□ -0.69
CLK3-220ENST00000567992 UBN1Q9NPG3 1134 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 OLFML3Q9NRN5 406 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 SNTG2Q9NY99 539 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 FAM13BQ9NYF5 915 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 DNAJB4Q9UDY4 337 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 TBX20Q9UMR3 447 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 GIT1Q9Y2X7 761 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 A0A0C4DFX4 3053 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 ANK1P16157 1881 aa10.76□□□□□ -0.69
CLK3-220ENST00000567992 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
CLK3-220ENST00000567992 FAM189A1O60320 539 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 TOM1L1O75674 476 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 FGF18O76093 207 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 POMCP01189 267 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 MCF2P10911 925 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 GAP43P17677 238 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 SCP2P22307 547 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 CASP1P29466 404 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 ANP32AP39687 249 aaKnown RBP10.75□□□□□ -0.69
CLK3-220ENST00000567992 GRM5P41594 1212 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 SLC11A1P49279 550 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 CASP5P51878 434 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 NDUFA8P51970 172 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 BCAR1P56945 870 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 EHHADHQ08426 723 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 STRN3Q13033 797 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 COASYQ13057 564 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 NAB2Q15742 525 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 TMEM132AQ24JP5 1023 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 ZNF568Q3ZCX4 644 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 ZC2HC1CQ53FD0 456 aaPredicted RBP10.75□□□□□ -0.69
CLK3-220ENST00000567992 MPZL3Q6UWV2 235 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 ZNF720Q7Z2F6 126 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 GRAMD1CQ8IYS0 662 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 GLIS3Q8NEA6 775 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 URGCPQ8TCY9 931 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 ZNF558Q96NG5 402 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 C7orf25Q9BPX7 421 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 ADPGKQ9BRR6 497 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 VN1R3Q9BXE9 311 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 LMAN2LQ9H0V9 348 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 IKZF4Q9H2S9 585 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 MARCH5Q9NX47 278 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 KLK14Q9P0G3 267 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 SEL1LQ9UBV2 794 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 PCDHB12Q9Y5F1 795 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 BRWD1Q9NSI6 2320 aa10.75□□□□□ -0.69
CLK3-220ENST00000567992 TISP43B9A030 160 aa10.74□□□□□ -0.69
CLK3-220ENST00000567992 ZC3H11AO75152 810 aaKnown RBP eCLIP10.74□□□□□ -0.69
CLK3-220ENST00000567992 EFEMP2O95967 443 aa10.74□□□□□ -0.69
CLK3-220ENST00000567992 GALTP07902 379 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms