RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ATICP31939 592 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 IFRD2Q12894 506 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 P3H1Q32P28 736 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 DNAL1Q4LDG9 190 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ACAD11Q709F0 780 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 AGR3Q8TD06 166 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 GFM2Q969S9 779 aaKnown RBP13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 ACAP3Q96P50 834 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 C15orf41Q9Y2V0 281 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 EMSYQ7Z589 1322 aa13.16□□□□□ -0.3
CSPG4P13-202ENST00000567704 PPP6R3Q5H9R7 873 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 DAB2IPQ5VWQ8 1189 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 TMEM270Q6UE05 265 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 XDHP47989 1333 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 WDR46O15213 610 aaKnown RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 ATP6V1B1P15313 513 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 ATP2B4P23634 1241 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 NSL1Q96IY1 281 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM118BQ9BPY3 351 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 MOV10L1Q9BXT6 1211 aaKnown RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 A0A0U1RQJ8 604 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 GDF11O95390 407 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 ARL4AP40617 200 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 INPP1P49441 399 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 PIK3C2BO00750 1634 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 CYP26A1O43174 497 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 KDM1AO60341 852 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 SEC24DO94855 1032 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZCWPW2Q504Y3 356 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 SUSD4Q5VX71 490 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 AENQ8WTP8 325 aaKnown RBP13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 SPC25Q9HBM1 224 aa13.15□□□□□ -0.3
CSPG4P13-202ENST00000567704 MADDQ8WXG6 1647 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 BMP3P12645 472 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 ALCAMQ13740 583 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 NEU2Q9Y3R4 380 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 RTN2O75298 545 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 COMTP21964 271 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 TOB1P50616 345 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 AP1B1Q10567 949 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 OVGP1Q12889 678 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 MTM1Q13496 603 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 TRIM67Q6ZTA4 783 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PDXKO00764 312 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 ADCY3O60266 1144 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 MAN1A2O60476 641 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 GHRP10912 638 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 ITGA8P53708 1063 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PRAMEP78395 509 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PRPSAP1Q14558 356 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PREPLQ4J6C6 727 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 RAB44Q7Z6P3 723 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 TPCN2Q8NHX9 752 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 SLC30A5Q8TAD4 765 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 FBXO25Q8TCJ0 367 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PACSIN1Q9BY11 444 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 CCDC90BQ9GZT6 254 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 ARHGAP20Q9P2F6 1191 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 CHMP2BQ9UQN3 213 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 KIF13AQ9H1H9 1805 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 SKOR1P84550 965 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 ORC2Q13416 577 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 MORF4L2Q15014 288 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 CCNYL1Q8N7R7 359 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 SLC7A3Q8WY07 619 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 NBPF3Q9H094 633 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 CHORDC1Q9UHD1 332 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
CSPG4P13-202ENST00000567704 GSTA4O15217 222 aa13.13□□□□□ -0.31
CSPG4P13-202ENST00000567704 RPS6KA5O75582 802 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms