RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CEP120Q8N960 986 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-215ENST00000566843 SLC20A1Q8WUM9 679 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 VTI1AQ96AJ9 217 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 MAGEB18Q96M61 343 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 CRAMP1Q96RY5 1269 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 IKZF4Q9H2S9 585 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 MEIS2O14770 477 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 UNC5CO95185 931 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 POTEJP0CG39 1038 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 IL1R1P14778 569 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 POLD1P28340 1107 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 MYL7Q01449 175 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 CALCOCO2Q13137 446 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 MTFR1Q15390 333 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 ARHGAP44Q17R89 818 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 PARP6Q2NL67 630 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 QRICH1Q2TAL8 776 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 RINT1Q6NUQ1 792 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 OTUD6AQ7L8S5 288 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 RAB3IPQ96QF0 476 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-215ENST00000566843 LGALS13Q9UHV8 139 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 VAV3Q9UKW4 847 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 TRIM33Q9UPN9 1127 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 STK38LQ9Y2H1 464 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 RABGAP1Q9Y3P9 1069 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 ECEL1O95672 775 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 NMT1P30419 496 aaKnown RBP16.81■□□□□ 0.28
COMMD4-215ENST00000566843 ABL2P42684 1182 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 KCTD1Q719H9 257 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 CCDC25Q86WR0 208 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 TEX9Q8N6V9 391 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 P2RX7Q99572 595 aaKnown RBP16.81■□□□□ 0.28
COMMD4-215ENST00000566843 KLHL14Q9P2G3 628 aa16.81■□□□□ 0.28
COMMD4-215ENST00000566843 TMEM110-MUSTN1A8MSY1 372 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 GNAZP19086 355 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 CMPK2Q5EBM0 449 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 ANKRD42Q8N9B4 389 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 UTP4Q969X6 686 aaKnown RBP16.8■□□□□ 0.28
COMMD4-215ENST00000566843 SAAL1Q96ER3 474 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 GPR101Q96P66 508 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-215ENST00000566843 TGS1Q96RS0 853 aaKnown RBP16.8■□□□□ 0.28
COMMD4-215ENST00000566843 FIZ1Q96SL8 496 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 DNAJC18Q9H819 358 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 LRRC42Q9Y546 428 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 PCDHA1Q9Y5I3 950 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 E7ENQ6 273 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 FAM13AO94988 1023 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 TTC4O95801 387 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 BRAFP15056 766 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 ITIH2P19823 946 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 KCNJ1P48048 391 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 MESDQ14696 234 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 COG2Q14746 738 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 ECHDC2Q86YB7 292 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 KCNK9Q9NPC2 374 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 TXLNGQ9NUQ3 528 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 FRMD4BQ9Y2L6 1034 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 PTPN22Q9Y2R2 807 aa16.8■□□□□ 0.28
COMMD4-215ENST00000566843 ADGRA3Q8IWK6 1321 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 ATP5HO75947 161 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 ACSL3O95573 720 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 TRIM49P0CI25 452 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 TRIM49CP0CI26 452 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 BCRP11274 1271 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 CIITAP33076 1130 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 ZC2HC1CQ53FD0 456 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-215ENST00000566843 RNF207Q6ZRF8 634 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 C1orf186Q6ZWK4 172 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 MICAL1Q8TDZ2 1067 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 NAF1Q96HR8 494 aaKnown RBP16.79■□□□□ 0.28
COMMD4-215ENST00000566843 EIF2AK1Q9BQI3 630 aaKnown RBP16.79■□□□□ 0.28
COMMD4-215ENST00000566843 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 ACTL7BQ9Y614 415 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 SFI1A8K8P3 1242 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 FSCN2O14926 492 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 GH1P01241 217 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 TAC1P20366 129 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 CHKAP35790 457 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 ARHGEF18Q6ZSZ5 1173 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 SYDE1Q6ZW31 735 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-215ENST00000566843 SLC9A9Q8IVB4 645 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 RPUSD2Q8IZ73 545 aaKnown RBP16.79■□□□□ 0.28
COMMD4-215ENST00000566843 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 GDAP1Q8TB36 358 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 FBF1Q8TES7 1133 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 LRMDAQ9H2I8 198 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 KIF9Q9HAQ2 790 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 SEL1LQ9UBV2 794 aa16.79■□□□□ 0.28
COMMD4-215ENST00000566843 FAM86B1E9PN63 330 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 MSH4O15457 936 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 FAM86B2P0C5J1 330 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 LINGO3P0C6S8 592 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 GZMAP12544 262 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 IVDP26440 423 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 STX2P32856 288 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 SREBF1P36956 1147 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 CYP4A11Q02928 519 aa16.78■□□□□ 0.28
COMMD4-215ENST00000566843 TAF11Q15544 211 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms