RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TP53BP2Q13625 1128 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 ZNF460Q14592 562 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 PDCD4Q53EL6 469 aaKnown RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 CDCA2Q69YH5 1023 aaPredicted RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 KIF18BQ86Y91 864 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 EFHBQ8N7U6 833 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 FAM98AQ8NCA5 519 aaKnown RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 ZFP28Q8NHY6 868 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 RSAD2Q8WXG1 361 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 SMG7Q92540 1137 aaKnown RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 TFAP2CQ92754 450 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 CLUHP3Q96NS8 147 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 KIAA1586Q9HCI6 787 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 TESQ9UGI8 421 aaKnown RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 FRMD4BQ9Y2L6 1034 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 CCDC9Q9Y3X0 531 aaKnown RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 USP15Q9Y4E8 981 aaPredicted RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 A0A1W2PR48 441 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 MYADML2A6NDP7 307 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 ELL2O00472 640 aaPredicted RBP3.51□□□□□ -1.85
SMG1-212ENST00000566328 DNAJC8O75937 253 aaPredicted RBP3.51□□□□□ -1.85
SMG1-212ENST00000566328 CDKL5O76039 1030 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 SPDEFO95238 335 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 GASTP01350 101 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 PFKMP08237 780 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 LTA4HP09960 611 aaKnown RBP3.51□□□□□ -1.85
SMG1-212ENST00000566328 FDXRP22570 491 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 MPLP40238 635 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 PTH2RP49190 550 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 MEF2AQ02078 507 aaPredicted RBP3.51□□□□□ -1.85
SMG1-212ENST00000566328 NHLH1Q02575 133 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 MGAT5Q09328 741 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 UBE3CQ15386 1083 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 C19orf54Q5BKX5 351 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 SP5Q6BEB4 398 aaPredicted RBP3.51□□□□□ -1.85
SMG1-212ENST00000566328 SYT12Q8IV01 421 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 SLC44A3Q8N4M1 653 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 MSL3Q8N5Y2 521 aaKnown RBP3.51□□□□□ -1.85
SMG1-212ENST00000566328 ADAM2Q99965 735 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 ORAI3Q9BRQ5 295 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 WNT8AQ9H1J5 351 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 ZMAT4Q9H898 229 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 KCNG1Q9UIX4 513 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 MSRAQ9UJ68 235 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 ATP11BQ9Y2G3 1177 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 NUMBLQ9Y6R0 609 aa3.51□□□□□ -1.85
SMG1-212ENST00000566328 MARCH11A6NNE9 402 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 IGLV2-14P01704 120 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 CFIP05156 583 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 ATP2A2P16615 1042 aaKnown RBP3.5□□□□□ -1.85
SMG1-212ENST00000566328 PLA2G5P39877 138 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 BMT2Q1RMZ1 405 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 GPR158Q5T848 1215 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 FAM102AQ5T9C2 384 aaPredicted RBP3.5□□□□□ -1.85
SMG1-212ENST00000566328 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SMG1-212ENST00000566328 BTNL9Q6UXG8 535 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 HOMEZQ8IX15 550 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 ASB10Q8WXI3 467 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 PAWRQ96IZ0 340 aaKnown RBP3.5□□□□□ -1.85
SMG1-212ENST00000566328 FDXACB1Q9BRP7 624 aaPredicted RBP3.5□□□□□ -1.85
SMG1-212ENST00000566328 TEX101Q9BY14 249 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 REXO4Q9GZR2 422 aaKnown RBP3.5□□□□□ -1.85
SMG1-212ENST00000566328 IGSF5Q9NSI5 407 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 MAGEC2Q9UBF1 373 aaPredicted RBP3.5□□□□□ -1.85
SMG1-212ENST00000566328 NOX1Q9Y5S8 564 aa3.5□□□□□ -1.85
SMG1-212ENST00000566328 PRAMEF4O60810 478 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 F2P00734 622 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 CTGFP29279 349 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 RARRES1P49788 294 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 ZNF169Q14929 603 aaPredicted RBP3.49□□□□□ -1.85
SMG1-212ENST00000566328 CREB3L3Q68CJ9 461 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 SRRM1Q8IYB3 904 aaKnown RBP3.49□□□□□ -1.85
SMG1-212ENST00000566328 ZNF384Q8TF68 577 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 ZNF496Q96IT1 587 aaPredicted RBP3.49□□□□□ -1.85
SMG1-212ENST00000566328 TBCCD1Q9NVR7 557 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 LRIT1Q9P2V4 623 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 MAP3K2Q9Y2U5 619 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 ZMYM3Q14202 1370 aa3.49□□□□□ -1.85
SMG1-212ENST00000566328 PJA2O43164 708 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 PROP1O75360 226 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 ITGA10O75578 1167 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 RFPL3O75679 317 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 LSP1P33241 339 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 RBM25P49756 843 aaKnown RBP3.48□□□□□ -1.85
SMG1-212ENST00000566328 CACNA2D1P54289 1103 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 SIM1P81133 766 aaPredicted RBP3.48□□□□□ -1.85
SMG1-212ENST00000566328 OCRLQ01968 901 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 PPARAQ07869 468 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 FOXF2Q12947 444 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 ZBTB41Q5SVQ8 909 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 AGAP9Q5VTM2 703 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 ANKS6Q68DC2 871 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 Q6ZNX1 250 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 RHOT2Q8IXI1 618 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 LILRB2Q8N423 598 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 RNF169Q8NCN4 708 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 OR14C36Q8NHC7 312 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 SNX33Q8WV41 574 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 ANKS1AQ92625 1134 aa3.48□□□□□ -1.85
SMG1-212ENST00000566328 Q96MF0 132 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms