RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 MCF2P10911 925 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 ZSCAN20P17040 1043 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-207ENST00000566095 THPOP40225 353 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 PMS1P54277 932 aaKnown RBP10.7□□□□□ -0.7
SF3B3-207ENST00000566095 SNX17Q15036 470 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 KIZQ2M2Z5 673 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 RUFY4Q6ZNE9 571 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 NECAB2Q7Z6G3 386 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 GLIS3Q8NEA6 775 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 KIAA1524Q8TCG1 905 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 TOX2Q96NM4 488 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 NAP1L5Q96NT1 182 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-207ENST00000566095 FNBP1Q96RU3 617 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 TSPAN18Q96SJ8 248 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 ACO2Q99798 780 aaKnown RBP10.7□□□□□ -0.7
SF3B3-207ENST00000566095 FGFBP2Q9BYJ0 223 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-207ENST00000566095 ADAMTS10Q9H324 1103 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 IFT122Q9HBG6 1241 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 DMAC2Q9NW81 257 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 ANKFY1Q9P2R3 1169 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 FBXL5Q9UKA1 691 aa10.7□□□□□ -0.7
SF3B3-207ENST00000566095 EVPLQ92817 2033 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 GOLGA6L9A6NEM1 432 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 KIF2AO00139 706 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 OGTO15294 1046 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 ARHGAP6O43182 974 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 RPS6KA5O75582 802 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 IL18RAPO95256 599 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 GTF2H1P32780 548 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 RAB27AP51159 221 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 YARSP54577 528 aaKnown RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 CDK17Q00537 523 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 MCL1Q07820 350 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 RBL2Q08999 1139 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 SNRNP35Q16560 246 aaKnown RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 FAM26DQ5JW98 314 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 TCERG1LQ5VWI1 586 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 SLC27A1Q6PCB7 646 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 PPFIBP1Q86W92 1011 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 KSR1Q8IVT5 923 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 TRIM59Q8IWR1 403 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 CD302Q8IX05 232 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 TMC2Q8TDI7 906 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 OSMRQ99650 979 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 CCDC94Q9BW85 323 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 TARS2Q9BW92 718 aaKnown RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 SENP6Q9GZR1 1112 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 C11orf49Q9H6J7 331 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 TOPORSQ9NS56 1045 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 SPTLC3Q9NUV7 552 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 INTS13Q9NVM9 706 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 MYO6Q9UM54 1294 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 R3HCC1Q9Y3T6 440 aaKnown RBP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 CDY2AQ9Y6F7 541 aa10.69□□□□□ -0.7
SF3B3-207ENST00000566095 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
SF3B3-207ENST00000566095 SIP14410 1827 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 A0A0B4J269 797 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 AKR1B15C9JRZ8 316 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 P4HA2O15460 535 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 AFPP02771 609 aaKnown RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 CLTAP09496 248 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 SELPP16109 830 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 HNRNPH3P31942 346 aaKnown RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 HOXD13P35453 343 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 KCNA1Q09470 495 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 BFSP1Q12934 665 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 PAK2Q13177 524 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 VWA3BQ502W6 1294 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 DCAF17Q5H9S7 520 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 TAS1R3Q7RTX0 852 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 ANKRD33Q7Z3H0 272 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 TMC6Q7Z403 805 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 FAM81BQ96LP2 452 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 FBXL18Q96ME1 805 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 FTHL17Q9BXU8 183 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 NDST4Q9H3R1 872 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 PCIF1Q9H4Z3 704 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 RPF1Q9H9Y2 349 aaKnown RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 TRMT13Q9NUP7 481 aaKnown RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 AGPAT5Q9NUQ2 364 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 CAPN11Q9UMQ6 739 aa10.68□□□□□ -0.7
SF3B3-207ENST00000566095 PIN4Q9Y237 131 aaKnown RBP10.68□□□□□ -0.7
SF3B3-207ENST00000566095 GRIN2DO15399 1336 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 A0A1B0GUA9 196 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 XPOTO43592 962 aaKnown RBP10.67□□□□□ -0.7
SF3B3-207ENST00000566095 B4GALT4O60513 344 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 TSPAN1O60635 241 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 RFX1P22670 979 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 ANXA13P27216 316 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 CDK7P50613 346 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 VAMP7P51809 220 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 ZNF200P98182 395 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-207ENST00000566095 UBXN1Q04323 297 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 TMEM62Q0P6H9 643 aa10.67□□□□□ -0.7
SF3B3-207ENST00000566095 SLC39A5Q6ZMH5 540 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms