RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 TRIM24O15164 1050 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 HOXA3O43365 443 aaPredicted RBP4.79□□□□□ -1.64
PALB2-204ENST00000566069 KDM1AO60341 852 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 RAB11FIP3O75154 756 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 LAG3P18627 525 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 CDK11BP21127 795 aaKnown RBP4.79□□□□□ -1.64
PALB2-204ENST00000566069 PTH2RP49190 550 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 CDKN1CP49918 316 aaPredicted RBP4.79□□□□□ -1.64
PALB2-204ENST00000566069 FAPQ12884 760 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 MYBPC3Q14896 1274 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 PRAMEF9Q5VWM5 478 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 IQSEC1Q6DN90 963 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 TIGD7Q6NT04 549 aaPredicted RBP4.79□□□□□ -1.64
PALB2-204ENST00000566069 FBXO42Q6P3S6 717 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 FRMD7Q6ZUT3 714 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 ESPNLQ6ZVH7 1005 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 RD3Q7Z3Z2 195 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 RASSF3Q86WH2 238 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 FAM98AQ8NCA5 519 aaKnown RBP4.79□□□□□ -1.64
PALB2-204ENST00000566069 CLRN3Q8NCR9 226 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 ARL8AQ96BM9 186 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 TUBGCP5Q96RT8 1024 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 CPEB1Q9BZB8 566 aaKnown RBP4.79□□□□□ -1.64
PALB2-204ENST00000566069 KCNH6Q9H252 994 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 POLR3BQ9NW08 1133 aaPredicted RBP4.79□□□□□ -1.64
PALB2-204ENST00000566069 ANKFY1Q9P2R3 1169 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 MSRAQ9UJ68 235 aa4.79□□□□□ -1.64
PALB2-204ENST00000566069 PHLDB1Q86UU1 1377 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 hCG_2014768A0A024R1R8 64 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 PPFIA4O75335 1185 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 ERBB2P04626 1255 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 TYRP1P17643 537 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 GNAT2P19087 354 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 NPEPPSP55786 919 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 BCAR1P56945 870 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 KIAA1841Q6NSI8 718 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 BHLHA9Q7RTU4 235 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 BMP8AQ7Z5Y6 402 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 PRPF38AQ8NAV1 312 aaKnown RBP4.78□□□□□ -1.64
PALB2-204ENST00000566069 RPGRQ92834 1020 aaKnown RBP4.78□□□□□ -1.64
PALB2-204ENST00000566069 SOX7Q9BT81 388 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 MS4A5Q9H3V2 200 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 POFUT1Q9H488 388 aa4.78□□□□□ -1.64
PALB2-204ENST00000566069 NOC2LQ9Y3T9 749 aaKnown RBP4.78□□□□□ -1.64
PALB2-204ENST00000566069 ALG1L2C9J202 215 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 K7ESF4 209 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 DAPK3O43293 454 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 MTSS1O43312 755 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 RECQL4O94761 1208 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 PRKD3O94806 890 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 PRPF6O94906 941 aaKnown RBP4.77□□□□□ -1.65
PALB2-204ENST00000566069 ADCY2Q08462 1091 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 FOXI1Q12951 378 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 PRR16Q569H4 304 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 METTL24Q5JXM2 366 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 CCDC62Q6P9F0 684 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 ARHGEF19Q8IW93 802 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 OR52N2Q8NGI0 321 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 FERMT2Q96AC1 680 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 ZNF496Q96IT1 587 aaPredicted RBP4.77□□□□□ -1.65
PALB2-204ENST00000566069 MYL10Q9BUA6 226 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 PITHD1Q9GZP4 211 aaPredicted RBP4.77□□□□□ -1.65
PALB2-204ENST00000566069 PUS7LQ9H0K6 701 aaKnown RBP4.77□□□□□ -1.65
PALB2-204ENST00000566069 WNT8AQ9H1J5 351 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 C14orf93Q9H972 538 aaKnown RBP4.77□□□□□ -1.65
PALB2-204ENST00000566069 ING3Q9NXR8 418 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 SLC5A4Q9NY91 659 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 KAT6AQ92794 2004 aa4.77□□□□□ -1.65
PALB2-204ENST00000566069 COL3A1P02461 1466 aaPredicted RBP4.76□□□□□ -1.65
PALB2-204ENST00000566069 ST20-MTHFSA0A0A6YYL1 179 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 ELL2O00472 640 aaPredicted RBP4.76□□□□□ -1.65
PALB2-204ENST00000566069 MAFGO15525 162 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 ITGB6P18564 788 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 MANFP55145 182 aaKnown RBP4.76□□□□□ -1.65
PALB2-204ENST00000566069 ANAPC15P60006 121 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 ZBTB41Q5SVQ8 909 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 COG1Q8WTW3 980 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 LINC00476Q8WZB0 136 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 ACAP3Q96P50 834 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 CPPED1Q9BRF8 314 aaPredicted RBP4.76□□□□□ -1.65
PALB2-204ENST00000566069 LSM14BQ9BX40 385 aaKnown RBP4.76□□□□□ -1.65
PALB2-204ENST00000566069 SLC46A2Q9BY10 475 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 TOPORSQ9NS56 1045 aaPredicted RBP4.76□□□□□ -1.65
PALB2-204ENST00000566069 PPP2R3BQ9Y5P8 575 aa4.76□□□□□ -1.65
PALB2-204ENST00000566069 LCHNA4D1U4 455 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 APOL3O95236 402 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 CDK4P11802 303 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 APOBEC3AP31941 199 aaPredicted RBP4.75□□□□□ -1.65
PALB2-204ENST00000566069 GUCY2FP51841 1108 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 USP14P54578 494 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 ERVK-21P61565 698 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 IGBP1P78318 339 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 VPS72Q15906 364 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 PDCD2LQ9BRP1 358 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 NDC1Q9BTX1 674 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 OSBPL6Q9BZF3 934 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 MTG2Q9H4K7 406 aa4.75□□□□□ -1.65
PALB2-204ENST00000566069 VTA1Q9NP79 307 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms