RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ARMC5Q96C12 935 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 ERGIC2Q96RQ1 377 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 SEZ6LQ9BYH1 1024 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 PTPRHQ9HD43 1115 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 TRMT13Q9NUP7 481 aaKnown RBP20.42■□□□□ 0.86
COMMD4-213ENST00000565834 TRPV2Q9Y5S1 764 aa20.42■□□□□ 0.86
COMMD4-213ENST00000565834 ITIH6Q6UXX5 1313 aa20.41■□□□□ 0.86
COMMD4-213ENST00000565834 ZNF233A6NK53 670 aa20.41■□□□□ 0.86
COMMD4-213ENST00000565834 ARF4P18085 180 aaPredicted RBP20.41■□□□□ 0.86
COMMD4-213ENST00000565834 FGFR4P22455 802 aa20.41■□□□□ 0.86
COMMD4-213ENST00000565834 SFPQP23246 707 aaKnown RBP eCLIP20.41■□□□□ 0.86
COMMD4-213ENST00000565834 VAMP7P51809 220 aa20.41■□□□□ 0.86
COMMD4-213ENST00000565834 NCBP1Q09161 790 aaKnown RBP20.41■□□□□ 0.86
COMMD4-213ENST00000565834 EEF1DP3Q658K8 133 aa20.41■□□□□ 0.86
COMMD4-213ENST00000565834 CPB2Q96IY4 423 aa20.41■□□□□ 0.86
COMMD4-213ENST00000565834 CDY2AQ9Y6F7 541 aa20.41■□□□□ 0.86
COMMD4-213ENST00000565834 BRCA2P51587 3418 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 ARVCFO00192 962 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 OGTO15294 1046 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 TRIM49P0CI25 452 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 TRIM49CP0CI26 452 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 ACOT2P49753 483 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 CYP24A1Q07973 514 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 SYCP1Q15431 976 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 USP37Q86T82 979 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 TMEM40Q8WWA1 233 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 MFSD14AQ96MC6 490 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 PDZD7Q9H5P4 517 aa20.4■□□□□ 0.86
COMMD4-213ENST00000565834 THPOP40225 353 aa20.39■□□□□ 0.86
COMMD4-213ENST00000565834 CCDC186Q7Z3E2 898 aa20.39■□□□□ 0.86
COMMD4-213ENST00000565834 CDR2LQ86X02 465 aaPredicted RBP20.39■□□□□ 0.86
COMMD4-213ENST00000565834 TMC2Q8TDI7 906 aa20.39■□□□□ 0.86
COMMD4-213ENST00000565834 U2AF1L4Q8WU68 220 aaKnown RBP20.39■□□□□ 0.86
COMMD4-213ENST00000565834 PCMTD1Q96MG8 357 aaPredicted RBP20.39■□□□□ 0.86
COMMD4-213ENST00000565834 CRISPLD2Q9H0B8 497 aa20.39■□□□□ 0.86
COMMD4-213ENST00000565834 CDT1Q9H211 546 aa20.39■□□□□ 0.86
COMMD4-213ENST00000565834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.39■□□□□ 0.86
COMMD4-213ENST00000565834 SGPL1O95470 568 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 CTSHP09668 335 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 CRELD2Q6UXH1 353 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 CCDC155Q8N6L0 562 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 CCDC127Q96BQ5 260 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 TRIM44Q96DX7 344 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 A0A1B0GUA9 196 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 FAM189A1O60320 539 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 B4GALT4O60513 344 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 TFRCP02786 760 aaKnown RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 MCF2P10911 925 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 GSDMDP57764 484 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 MCCD1P59942 119 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 DLG4P78352 724 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 ENPEPQ07075 957 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 TBX2Q13207 712 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 TRIM14Q14142 442 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 ZBTB41Q5SVQ8 909 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 PPFIBP1Q86W92 1011 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 PLEKHO2Q8TD55 490 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 PARD3BQ8TEW8 1205 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 DHX38Q92620 1227 aaKnown RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 ADPGKQ9BRR6 497 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 SENP6Q9GZR1 1112 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 TRPV6Q9H1D0 765 aa20.38■□□□□ 0.85
COMMD4-213ENST00000565834 RBAKQ9NYW8 714 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-213ENST00000565834 TULP1O00294 542 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-213ENST00000565834 STX10O60499 249 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 CHRNA1P02708 482 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 AXLP30530 894 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 FMO5P49326 533 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 MGAT3Q09327 533 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 SEZ6Q53EL9 994 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 NOTUMQ6P988 496 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 APBB1IPQ7Z5R6 666 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-213ENST00000565834 THNSL1Q8IYQ7 743 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 MMRN2Q9H8L6 949 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 AGPAT5Q9NUQ2 364 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 SIK3Q9Y2K2 1263 aa20.37■□□□□ 0.85
COMMD4-213ENST00000565834 N4BP1O75113 896 aaKnown RBP20.36■□□□□ 0.85
COMMD4-213ENST00000565834 CAND2O75155 1236 aa20.36■□□□□ 0.85
COMMD4-213ENST00000565834 TPM1P09493 284 aa20.36■□□□□ 0.85
COMMD4-213ENST00000565834 HOXA11P31270 313 aaPredicted RBP20.36■□□□□ 0.85
COMMD4-213ENST00000565834 KLK7P49862 253 aa20.36■□□□□ 0.85
COMMD4-213ENST00000565834 PSMD6Q15008 389 aa20.36■□□□□ 0.85
COMMD4-213ENST00000565834 TRIM71Q2Q1W2 868 aaKnown RBP20.36■□□□□ 0.85
COMMD4-213ENST00000565834 C1orf220Q5T0J3 134 aa20.36■□□□□ 0.85
COMMD4-213ENST00000565834 CRACR2AQ9BSW2 395 aa20.36■□□□□ 0.85
COMMD4-213ENST00000565834 GTPBP10A4D1E9 387 aaKnown RBP20.35■□□□□ 0.85
COMMD4-213ENST00000565834 LRRIQ3A6PVS8 624 aaPredicted RBP20.35■□□□□ 0.85
COMMD4-213ENST00000565834 DLATP10515 647 aaKnown RBP20.35■□□□□ 0.85
COMMD4-213ENST00000565834 TRIM21P19474 475 aaKnown RBP20.35■□□□□ 0.85
COMMD4-213ENST00000565834 TNFSF9P41273 254 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 CDK7P50613 346 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 MYL7Q01449 175 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 DCAF4L1Q3SXM0 396 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 GBP6Q6ZN66 633 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 BRSK2Q8IWQ3 736 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 FNBP1Q96RU3 617 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 NUP58Q9BVL2 599 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 CPSF3Q9UKF6 684 aaKnown RBP20.35■□□□□ 0.85
COMMD4-213ENST00000565834 PIN4Q9Y237 131 aaKnown RBP20.35■□□□□ 0.85
COMMD4-213ENST00000565834 NOC2LQ9Y3T9 749 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms