RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 PALB2Q86YC2 1186 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 ZNF280BQ86YH2 543 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 SPZ1Q9BXG8 430 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 RXFP1Q9HBX9 757 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 AGO4Q9HCK5 861 aaKnown RBP12.56□□□□□ -0.4
CAPN3-215ENST00000565559 KANSL3Q9P2N6 904 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 TCEAL9Q9UHQ7 104 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 SPEGQ15772 3267 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 SRRM3A6NNA2 597 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-215ENST00000565559 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
CAPN3-215ENST00000565559 KCNK5O95279 499 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 CCNE2O96020 404 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 GPC3P51654 580 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 RING1Q06587 406 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 TROAPQ12815 778 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 CEP55Q53EZ4 464 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 ZNF668Q96K58 619 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-215ENST00000565559 KXD1Q9BQD3 176 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 GCOM2Q9BZD3 368 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-215ENST00000565559 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.55□□□□□ -0.4
CAPN3-215ENST00000565559 GCN1Q92616 2671 aaKnown RBP12.55□□□□□ -0.4
CAPN3-215ENST00000565559 DOCK8Q8NF50 2099 aa12.55□□□□□ -0.4
CAPN3-215ENST00000565559 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 NRP1O14786 923 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 TM4SF5O14894 197 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 TGM5O43548 720 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 CHMLP26374 656 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 CDC42EP1Q00587 391 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 CREMQ03060 361 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 PSAPL1Q6NUJ1 521 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 CWC27Q6UX04 472 aaKnown RBP12.54□□□□□ -0.4
CAPN3-215ENST00000565559 CEP68Q76N32 757 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 CYB5R4Q7L1T6 521 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 GRASPQ7Z6J2 395 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-215ENST00000565559 LRRC71Q8N4P6 559 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 CTCFLQ8NI51 663 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-215ENST00000565559 RUFY2Q8WXA3 655 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 FGF13Q92913 245 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 DSCC1Q9BVC3 393 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 FAM105AQ9NUU6 356 aa12.54□□□□□ -0.4
CAPN3-215ENST00000565559 NDRG2Q9UN36 371 aaKnown RBP12.54□□□□□ -0.4
CAPN3-215ENST00000565559 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
CAPN3-215ENST00000565559 PRG3Q9Y2Y8 225 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-215ENST00000565559 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
CAPN3-215ENST00000565559 ATP4AP20648 1035 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 ZNF76P36508 570 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 CXCL12P48061 93 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 DSG1Q02413 1049 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 FOXC1Q12948 553 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 STPG1Q5TH74 334 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 LSM14BQ9BX40 385 aaKnown RBP12.53□□□□□ -0.4
CAPN3-215ENST00000565559 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-215ENST00000565559 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 HEBP1Q9NRV9 189 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 MAFBQ9Y5Q3 323 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-215ENST00000565559 COL4A3Q01955 1670 aa12.53□□□□□ -0.4
CAPN3-215ENST00000565559 MEIS3P2A8K0S8 358 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 B4GALT3O60512 393 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 ZNF623O75123 536 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 NR1I2O75469 434 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 CSDE1O75534 798 aaKnown RBP12.52□□□□□ -0.41
CAPN3-215ENST00000565559 DDHD2O94830 711 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 PSAPP07602 524 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 HNRNPA1P09651 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
CAPN3-215ENST00000565559 OR1G1P47890 313 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 FZD5Q13467 585 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 SF3A2Q15428 464 aaKnown RBP12.52□□□□□ -0.41
CAPN3-215ENST00000565559 TAS1R1Q7RTX1 841 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 LONP2Q86WA8 852 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 SKAP1Q86WV1 359 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-215ENST00000565559 LINC01465Q8N7H1 131 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 ZCCHC14Q8WYQ9 949 aaKnown RBP12.52□□□□□ -0.41
CAPN3-215ENST00000565559 DNASE1L2Q92874 299 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 RSAD1Q9HA92 442 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 POLIQ9UNA4 740 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 CNTNAP2Q9UHC6 1331 aa12.52□□□□□ -0.41
CAPN3-215ENST00000565559 CHURC1-FNTBB4DL54 471 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 MEIS1O00470 390 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 XYLBO75191 536 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 POMCP01189 267 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 FNTBP49356 437 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
CAPN3-215ENST00000565559 GNAQP50148 359 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 NOVA1P51513 510 aaKnown RBP12.51□□□□□ -0.41
CAPN3-215ENST00000565559 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 GLYCTKQ8IVS8 523 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 SMAP1Q8IYB5 467 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-215ENST00000565559 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 NRBP2Q9NSY0 501 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 MARCH5Q9NX47 278 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 FNIP2Q9P278 1114 aa12.51□□□□□ -0.41
CAPN3-215ENST00000565559 PCDHB2Q9Y5E7 798 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms