RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CASP4P49662 377 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 MCCD1P59942 119 aaPredicted RBP20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 ENPEPQ07075 957 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 GRIN2CQ14957 1233 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 TAF2Q6P1X5 1199 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 SLC39A4Q6P5W5 647 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 SRGAP1Q7Z6B7 1085 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 BORCS6Q96GS4 357 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 ERGIC2Q96RQ1 377 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 CBWD1Q9BRT8 395 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 GTF2IRD1Q9UHL9 959 aa20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.81■□□□□ 0.92
CSPG4P13-201ENST00000565545 TRIP12Q14669 1992 aaPredicted RBP20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 LDHAP00338 332 aaKnown RBP20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 KRT13P13646 458 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 DNAJB2P25686 324 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 ADSSP30520 456 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 GPC3P51654 580 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 MBTD1Q05BQ5 628 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 PTPN11Q06124 597 aaPredicted RBP20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 PCBP1Q15365 356 aaKnown RBP eCLIP20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 NBPF20Q3BBV1 942 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 INTS8Q75QN2 995 aaKnown RBP20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 POMGNT1Q8WZA1 660 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 ZBTB10Q96DT7 871 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 IQCDQ96DY2 449 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 PRIMPOLQ96LW4 560 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 FBXL18Q96ME1 805 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 PCIF1Q9H4Z3 704 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 IFT122Q9HBG6 1241 aa20.8■□□□□ 0.92
CSPG4P13-201ENST00000565545 INO80B-WBP1J3KQ70 363 aa20.79■□□□□ 0.92
CSPG4P13-201ENST00000565545 VTNP04004 478 aa20.79■□□□□ 0.92
CSPG4P13-201ENST00000565545 TRIM14Q14142 442 aa20.79■□□□□ 0.92
CSPG4P13-201ENST00000565545 CCDC186Q7Z3E2 898 aa20.79■□□□□ 0.92
CSPG4P13-201ENST00000565545 GPD1LQ8N335 351 aa20.79■□□□□ 0.92
CSPG4P13-201ENST00000565545 TIFAQ96CG3 184 aa20.79■□□□□ 0.92
CSPG4P13-201ENST00000565545 INO80BQ9C086 356 aaPredicted RBP20.79■□□□□ 0.92
CSPG4P13-201ENST00000565545 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 A0A087WZ62 844 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 TISP43B9A030 160 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 TREHO43280 583 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 TOM1L1O75674 476 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 AFPP02771 609 aaKnown RBP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 NLRP11P59045 1033 aaKnown RBP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 TBX2Q13207 712 aaPredicted RBP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 MFSD5Q6N075 450 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 USP37Q86T82 979 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 NLRP7Q8WX94 980 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 ACO2Q99798 780 aaKnown RBP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 FDXACB1Q9BRP7 624 aaPredicted RBP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 NUP58Q9BVL2 599 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 TARS2Q9BW92 718 aaKnown RBP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 SEZ6LQ9BYH1 1024 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 GCOM2Q9BZD3 368 aaPredicted RBP20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 ZNF576Q9H609 170 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 TBX21Q9UL17 535 aa20.78■□□□□ 0.92
CSPG4P13-201ENST00000565545 EXTL3O43909 919 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 TPM1P09493 284 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 KCNH2Q12809 1159 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 BFSP1Q12934 665 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 PPIGQ13427 754 aaKnown RBP eCLIP20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 PRPF4BQ13523 1007 aaKnown RBP20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 HIC1Q14526 733 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 SNRNP35Q16560 246 aaKnown RBP20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 TSHZ1Q6ZSZ6 1077 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 RSPH3Q86UC2 560 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 PPFIBP1Q86W92 1011 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 CCDC150Q8NCX0 1101 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 SLC35C1Q96A29 364 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 SCLT1Q96NL6 688 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 FAM49AQ9H0Q0 323 aaPredicted RBP20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 ADAMTS10Q9H324 1103 aa20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 AGO2Q9UKV8 859 aaKnown RBP20.77■□□□□ 0.92
CSPG4P13-201ENST00000565545 A0A0B4J269 797 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 TLR3O15455 904 aaKnown RBP20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 CLDN3O15551 220 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 STX10O60499 249 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 GPR32O75388 356 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 RUFY4Q6ZNE9 571 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 TMEM199Q8N511 208 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 TMC2Q8TDI7 906 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 DNAJB3Q8WWF6 145 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 MFSD14AQ96MC6 490 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 MSTO1Q9BUK6 570 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 TNFSF13BQ9Y275 285 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 CNTNAP2Q9UHC6 1331 aa20.76■□□□□ 0.91
CSPG4P13-201ENST00000565545 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 GTPBP10A4D1E9 387 aaKnown RBP20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 ZNF233A6NK53 670 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 ARVCFO00192 962 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 PROZP22891 400 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 CDK7P50613 346 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 VAMP7P51809 220 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 SYCP1Q15431 976 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 FIGNQ5HY92 759 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 ATF7IP2Q5U623 682 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 TCERG1LQ5VWI1 586 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 RPAINQ86UA6 219 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 PPP1R12CQ9BZL4 782 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms