RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ORC2Q13416 577 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-209ENST00000565511 TMEM87AQ8NBN3 555 aa26.29■■□□□ 1.8
RAB40C-209ENST00000565511 PBXIP1Q96AQ6 731 aa26.29■■□□□ 1.8
RAB40C-209ENST00000565511 NECTIN4Q96NY8 510 aa26.29■■□□□ 1.8
RAB40C-209ENST00000565511 KIFC3Q9BVG8 833 aa26.29■■□□□ 1.8
RAB40C-209ENST00000565511 TRIM6Q9C030 488 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-209ENST00000565511 CCDC113Q9H0I3 377 aa26.29■■□□□ 1.8
RAB40C-209ENST00000565511 PDZD7Q9H5P4 517 aa26.29■■□□□ 1.8
RAB40C-209ENST00000565511 ARHGEF35A5YM69 484 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 PDGFBP01127 241 aaPredicted RBP26.28■■□□□ 1.8
RAB40C-209ENST00000565511 CYP11B2P19099 503 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 KLRC2P26717 231 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 IER5LQ5T953 404 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 CABP7Q86V35 215 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 FAM184AQ8NB25 1140 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 MFSD14AQ96MC6 490 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 RIPOR3Q96MK2 946 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 PAAF1Q9BRP4 392 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 MRPL17Q9NRX2 175 aaKnown RBP26.28■■□□□ 1.8
RAB40C-209ENST00000565511 PCDHB6Q9Y5E3 794 aa26.28■■□□□ 1.8
RAB40C-209ENST00000565511 TRIP11Q15643 1979 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 TEX28O15482 410 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 URODP06132 367 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 ASGR2P07307 311 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 MYBP10242 640 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 U2AF2P26368 475 aaKnown RBP eCLIP26.27■■□□□ 1.8
RAB40C-209ENST00000565511 FXR2P51116 673 aaKnown RBP eCLIP26.27■■□□□ 1.8
RAB40C-209ENST00000565511 NCBP1Q09161 790 aaKnown RBP26.27■■□□□ 1.8
RAB40C-209ENST00000565511 FAM187BQ17R55 369 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 KIAA0319Q5VV43 1072 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 EEF1DP3Q658K8 133 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 KREMEN2Q8NCW0 462 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 PRSS33Q8NF86 280 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 ERMNQ8TAM6 284 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 RPS6KC1Q96S38 1066 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 EMILIN2Q9BXX0 1053 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 GPR62Q9BZJ7 368 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 PRMT7Q9NVM4 692 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-209ENST00000565511 PARP2Q9UGN5 583 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 NR2E1Q9Y466 385 aa26.27■■□□□ 1.8
RAB40C-209ENST00000565511 PP2D1A8MPX8 630 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 BRD1O95696 1058 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 CCT6AP40227 531 aaKnown RBP26.26■■□□□ 1.79
RAB40C-209ENST00000565511 VCPP55072 806 aaKnown RBP26.26■■□□□ 1.79
RAB40C-209ENST00000565511 NHLH1Q02575 133 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 IL17AQ16552 155 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 GPR149Q86SP6 731 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 PPFIBP1Q86W92 1011 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 SFXN1Q9H9B4 322 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 VWA8A3KMH1 1905 aa26.26■■□□□ 1.79
RAB40C-209ENST00000565511 MTCL1Q9Y4B5 1905 aaKnown RBP26.26■■□□□ 1.79
RAB40C-209ENST00000565511 PTGESO14684 152 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 CD2BP2O95400 341 aaKnown RBP26.25■■□□□ 1.79
RAB40C-209ENST00000565511 PRKCBP05771 671 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 LIG1P18858 919 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 TRAPPC10P48553 1259 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 GLUD2P49448 558 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 GRIK3Q13003 919 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 GNL2Q13823 731 aaKnown RBP26.25■■□□□ 1.79
RAB40C-209ENST00000565511 ZBTB8OSQ8IWT0 167 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 PRIMPOLQ96LW4 560 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 BHMT2Q9H2M3 363 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 RXFP1Q9HBX9 757 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 MAN1C1Q9NR34 630 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 SNTG2Q9NY99 539 aa26.25■■□□□ 1.79
RAB40C-209ENST00000565511 ZMYM2Q9UBW7 1377 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 DSG1Q02413 1049 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 PTGDRQ13258 359 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 ATAT1Q5SQI0 421 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 FUT10Q6P4F1 479 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 FBXL6Q8N531 539 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 TDRD5Q8NAT2 981 aaKnown RBP26.24■■□□□ 1.79
RAB40C-209ENST00000565511 CHST7Q9NS84 486 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 STK39Q9UEW8 545 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 LRWD1Q9UFC0 647 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 NOL7Q9UMY1 257 aaKnown RBP26.24■■□□□ 1.79
RAB40C-209ENST00000565511 KIAA1024Q9UPX6 916 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 DOCK6Q96HP0 2047 aa26.24■■□□□ 1.79
RAB40C-209ENST00000565511 DOCK8Q8NF50 2099 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 NAMPTP43490 491 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 NAB2Q15742 525 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 HAUS3Q68CZ6 603 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 ZBTB33Q86T24 672 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 HACE1Q8IYU2 909 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 IGSF22Q8N9C0 903 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 DDX19AQ9NUU7 478 aaKnown RBP26.23■■□□□ 1.79
RAB40C-209ENST00000565511 LIMD1Q9UGP4 676 aa26.23■■□□□ 1.79
RAB40C-209ENST00000565511 RECQL4O94761 1208 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 SPATA31D3P0C874 917 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 RPL17P18621 184 aaKnown RBP26.22■■□□□ 1.79
RAB40C-209ENST00000565511 IGFBP6P24592 240 aaPredicted RBP26.22■■□□□ 1.79
RAB40C-209ENST00000565511 CDC25AP30304 524 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 PRPF4BQ13523 1007 aaKnown RBP26.22■■□□□ 1.79
RAB40C-209ENST00000565511 NT5DC1Q5TFE4 455 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 SPATA31D4Q6ZUB0 917 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 KCNK18Q7Z418 384 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 ZDHHC14Q8IZN3 488 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 DEPTORQ8TB45 409 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 SNX29Q8TEQ0 813 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 HASPINQ8TF76 798 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms