RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CMASQ8NFW8 434 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-213ENST00000565173 B3GALT6Q96L58 329 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 RHOBTB2Q9BYZ6 727 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 BRMS1Q9HCU9 246 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 GPRC5CQ9NQ84 441 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 MAN1C1Q9NR34 630 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 FAM86C1Q9NVL1 165 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 SSX2IPQ9Y2D8 614 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 CACNA1HO95180 2353 aa9.53□□□□□ -0.88
CAPN3-213ENST00000565173 C2orf16Q68DN1 1984 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 CCDC195A0A1B0GUA6 201 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 TTLL13PA6NNM8 815 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 H0Y858 1186 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-213ENST00000565173 MED24O75448 989 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 RFPL2O75678 378 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 C1RP00736 705 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 URODP06132 367 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 NPR3P17342 541 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 GLUD2P49448 558 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 PLXNA3P51805 1871 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 FOSBP53539 338 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 CDCA2Q69YH5 1023 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-213ENST00000565173 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-213ENST00000565173 SLC27A1Q6PCB7 646 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 LILRA6Q6PI73 481 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 MAEAQ7L5Y9 396 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 OTOP3Q7RTS5 596 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 RABGGTAQ92696 567 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 ZNF707Q96C28 371 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-213ENST00000565173 ACSF2Q96CM8 615 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-213ENST00000565173 PAAF1Q9BRP4 392 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 COLEC11Q9BWP8 271 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 APOL6Q9BWW8 343 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 POLR3FQ9H1D9 316 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-213ENST00000565173 FZD8Q9H461 694 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 KCNK12Q9HB15 430 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 WDR6Q9NNW5 1121 aaKnown RBP9.52□□□□□ -0.89
CAPN3-213ENST00000565173 KLK14Q9P0G3 267 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 CACNG4Q9UBN1 327 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 DCHS1Q96JQ0 3298 aa9.52□□□□□ -0.89
CAPN3-213ENST00000565173 ZMYM2Q9UBW7 1377 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 TGM5O43548 720 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 USO1O60763 962 aaKnown RBP9.51□□□□□ -0.89
CAPN3-213ENST00000565173 NPTXRO95502 500 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 GLUD1P00367 558 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 EDN1P05305 212 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 ADH1AP07327 375 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 SPATA31D3P0C874 917 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 MYBP10242 640 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 MCM7P33993 719 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 CLCN5P51795 746 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 GUCY1B3Q02153 619 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 TDGQ13569 410 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 NAB2Q15742 525 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 FAM187BQ17R55 369 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 CWF19L1Q69YN2 538 aaKnown RBP9.51□□□□□ -0.89
CAPN3-213ENST00000565173 FUT10Q6P4F1 479 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 CYP26C1Q6V0L0 522 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 PPP4R3CPQ6ZMV5 832 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 SPATA31D4Q6ZUB0 917 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 CCDC149Q6ZUS6 474 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 GPR65Q8IYL9 337 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 HDAC7Q8WUI4 952 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 BSNDQ8WZ55 320 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 ATOH1Q92858 354 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-213ENST00000565173 POLR3CQ9BUI4 534 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-213ENST00000565173 TRIM6Q9C030 488 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-213ENST00000565173 CCDC113Q9H0I3 377 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 NT5C3AQ9H0P0 336 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 CXCL16Q9H2A7 254 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 TUFT1Q9NNX1 390 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 FNIP2Q9P278 1114 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 ADAM28Q9UKQ2 775 aa9.51□□□□□ -0.89
CAPN3-213ENST00000565173 LRRIQ4A6NIV6 560 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PROB1E7EW31 1015 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PTGESO14684 152 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PI15O43692 258 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 NR1I2O75469 434 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 ATP2B1P20020 1258 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 RPA1P27694 616 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 GRIK3Q13003 919 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 TRIM29Q14134 588 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 ECM1Q16610 540 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 USP41Q3LFD5 358 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PALB2Q86YC2 1186 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 HACE1Q8IYU2 909 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 C4orf32Q8N8J7 132 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 MCPH1Q8NEM0 835 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 RSAD2Q8WXG1 361 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PRIMPOLQ96LW4 560 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 NACC1Q96RE7 527 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 MYADMQ96S97 322 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 IRF2BPLQ9H1B7 796 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PLEKHA4Q9H4M7 779 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PDZD7Q9H5P4 517 aa9.5□□□□□ -0.89
CAPN3-213ENST00000565173 PRMT7Q9NVM4 692 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms