RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NAIF1Q69YI7 327 aaPredicted RBP6.64□□□□□ -1.35
UBR1-205ENST00000564540 REPS2Q8NFH8 660 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 CEP95Q96GE4 821 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 ACE2Q9BYF1 805 aaPredicted RBP6.64□□□□□ -1.35
UBR1-205ENST00000564540 TMX1Q9H3N1 280 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 MMRN2Q9H8L6 949 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 TRPS1Q9UHF7 1281 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 HDAC5Q9UQL6 1122 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 WNT10BO00744 389 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 MTHFD2P13995 350 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 MFSD14BQ5SR56 506 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 RNF187Q5TA31 235 aaPredicted RBP6.63□□□□□ -1.35
UBR1-205ENST00000564540 Q6ZVL8 140 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 USP51Q70EK9 711 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 DOK3Q7L591 496 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 CNTD1Q8N815 330 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 GPR156Q8NFN8 814 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 FBXO18Q8NFZ0 1043 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 FATE1Q969F0 183 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 PAWRQ96IZ0 340 aaKnown RBP6.63□□□□□ -1.35
UBR1-205ENST00000564540 SLC2A13Q96QE2 648 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 PDCD2LQ9BRP1 358 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 SLC5A4Q9NY91 659 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 SCOCQ9UIL1 159 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 SORCS3Q9UPU3 1222 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
UBR1-205ENST00000564540 REXO2Q9Y3B8 237 aaKnown RBP6.63□□□□□ -1.35
UBR1-205ENST00000564540 CYR61O00622 381 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 RPS6KA4O75676 772 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 GASTP01350 101 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 CRHR1P34998 444 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 MTNR1BP49286 362 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 PPP3CAQ08209 521 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 ABHD18Q0P651 414 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 VPS72Q15906 364 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 MUM1L1Q5H9M0 696 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 GPRIN1Q7Z2K8 1008 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 ZNF483Q8TF39 744 aaPredicted RBP6.62□□□□□ -1.35
UBR1-205ENST00000564540 PCED1AQ9H1Q7 454 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 GREM2Q9H772 168 aa6.62□□□□□ -1.35
UBR1-205ENST00000564540 WASHC2AQ641Q2 1341 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 K7ESF4 209 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 PHF2O75151 1096 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 HSP90B1P14625 803 aaKnown RBP6.61□□□□□ -1.35
UBR1-205ENST00000564540 PTPN7P35236 360 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 KLF1Q13351 362 aaPredicted RBP6.61□□□□□ -1.35
UBR1-205ENST00000564540 CPT1CQ8TCG5 803 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 CLIP3Q96DZ5 547 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 SPON1Q9HCB6 807 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 GPRC5BQ9NZH0 403 aa6.61□□□□□ -1.35
UBR1-205ENST00000564540 PRR5-ARHGAP8B1AHC4 643 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 LEFTY2O00292 366 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 SCAF4O95104 1147 aaKnown RBP6.6□□□□□ -1.35
UBR1-205ENST00000564540 NR4A1P22736 598 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 APOBEC3AP31941 199 aaPredicted RBP6.6□□□□□ -1.35
UBR1-205ENST00000564540 MCM7P33993 719 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 CDKN1CP49918 316 aaPredicted RBP6.6□□□□□ -1.35
UBR1-205ENST00000564540 HMGA2P52926 109 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 MALLQ13021 153 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 ANO4Q32M45 955 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 METTL24Q5JXM2 366 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 SYT12Q8IV01 421 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 TRMT2AQ8IZ69 625 aaKnown RBP6.6□□□□□ -1.35
UBR1-205ENST00000564540 ZNF276Q8N554 614 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 RNF169Q8NCN4 708 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 SLC35B2Q8TB61 432 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 HOXB13Q92826 284 aaPredicted RBP6.6□□□□□ -1.35
UBR1-205ENST00000564540 MENTQ9BUN1 341 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 RBM12Q9NTZ6 932 aaKnown RBP6.6□□□□□ -1.35
UBR1-205ENST00000564540 EIF2B4Q9UI10 523 aaKnown RBP6.6□□□□□ -1.35
UBR1-205ENST00000564540 PCDHGA2Q9Y5H1 932 aa6.6□□□□□ -1.35
UBR1-205ENST00000564540 B5MCH6 92 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 GSPT1P15170 499 aaKnown RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 ECHS1P30084 290 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 IARSP41252 1262 aaKnown RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 MCAMP43121 646 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 SLC5A3P53794 718 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 AMPD3Q01432 767 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 FHL2Q14192 279 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 NOMO1Q15155 1222 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 PDZD4Q76G19 769 aaPredicted RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 CBARPQ8N350 705 aaPredicted RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 OR7D4Q8NG98 312 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 SLC25A43Q8WUT9 341 aaPredicted RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 NEU4Q8WWR8 484 aaPredicted RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 LARP4BQ92615 738 aaKnown RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 NDC1Q9BTX1 674 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 PUS7LQ9H0K6 701 aaKnown RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 KCNH6Q9H252 994 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 ZNF768Q9H5H4 540 aaKnown RBP6.59□□□□□ -1.35
UBR1-205ENST00000564540 NRDE2Q9H7Z3 1164 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 BCO1Q9HAY6 547 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 GPR45Q9Y5Y3 372 aa6.59□□□□□ -1.35
UBR1-205ENST00000564540 TBKBP1A7MCY6 615 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 AHRRA9YTQ3 701 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 PEX11BO96011 259 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 MAKP20794 623 aa6.58□□□□□ -1.36
UBR1-205ENST00000564540 CDK11BP21127 795 aaKnown RBP6.58□□□□□ -1.36
UBR1-205ENST00000564540 AGXTP21549 392 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms