RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ERLIN2O94905 339 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 GJB5O95377 273 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 CA3P07451 260 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 DARSP14868 501 aaKnown RBP18.54■□□□□ 0.56
CMTM3-208ENST00000564247 HOXD13P35453 343 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 LIG4P49917 911 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 PRPF4BQ13523 1007 aaKnown RBP18.54■□□□□ 0.56
CMTM3-208ENST00000564247 FAM187BQ17R55 369 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 GAS2L3Q86XJ1 694 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 RNF214Q8ND24 703 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 PRIMPOLQ96LW4 560 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 CCDC113Q9H0I3 377 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 CDHR5Q9HBB8 845 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 SQORQ9Y6N5 450 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 RBAK-RBAKDNI3L0D1 243 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 TLL1O43897 1013 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 AMHP03971 560 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 GHRP10912 638 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 SFPQP23246 707 aaKnown RBP eCLIP18.53■□□□□ 0.56
CMTM3-208ENST00000564247 FKBP3Q00688 224 aaKnown RBP18.53■□□□□ 0.56
CMTM3-208ENST00000564247 LPIN1Q14693 890 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 IQCB1Q15051 598 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 EDRF1Q3B7T1 1238 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 FBXO47Q5MNV8 452 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 SLFN12LQ6IEE8 588 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 ZPBP2Q6X784 338 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.53■□□□□ 0.564e-6■■■□□ 19.2
CMTM3-208ENST00000564247 TAS1R3Q7RTX0 852 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 CATSPER4Q7RTX7 472 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 CSGALNACT2Q8N6G5 542 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 NOC3LQ8WTT2 800 aaKnown RBP18.53■□□□□ 0.56
CMTM3-208ENST00000564247 ZBED2Q9BTP6 218 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 MINDY3Q9H8M7 445 aa18.53■□□□□ 0.56
CMTM3-208ENST00000564247 TRIM49BA6NDI0 452 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 CETN3O15182 167 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 TGFB1I1O43294 461 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 PIGRP01833 764 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 FOSL2P15408 326 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 MATR3P43243 847 aaKnown RBP eCLIP18.52■□□□□ 0.56
CMTM3-208ENST00000564247 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
CMTM3-208ENST00000564247 ADAM9Q13443 819 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 HSP90AA2PQ14568 343 aaPredicted RBP18.52■□□□□ 0.56
CMTM3-208ENST00000564247 TTI2Q6NXR4 508 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 TSHZ1Q6ZSZ6 1077 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 TMCO2Q7Z6W1 182 aaPredicted RBP18.52■□□□□ 0.56
CMTM3-208ENST00000564247 DHX40Q8IX18 779 aaKnown RBP18.52■□□□□ 0.56
CMTM3-208ENST00000564247 USP38Q8NB14 1042 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 RAD9AQ99638 391 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 TCHPQ9BT92 498 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 SRRTQ9BXP5 876 aaKnown RBP18.52■□□□□ 0.56
CMTM3-208ENST00000564247 RBSNQ9H1K0 784 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 AGPAT3Q9NRZ7 376 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 NFE2L3Q9Y4A8 694 aa18.52■□□□□ 0.56
CMTM3-208ENST00000564247 UNC80Q8N2C7 3258 aa18.52■□□□□ 0.55
CMTM3-208ENST00000564247 CLIC2O15247 247 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 CSDE1O75534 798 aaKnown RBP18.51■□□□□ 0.55
CMTM3-208ENST00000564247 RPS6KA5O75582 802 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 MYBPC2Q14324 1141 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 GSE1Q14687 1217 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 NFIL3Q16649 462 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 ZCWPW2Q504Y3 356 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 ARMCX5Q6P1M9 558 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 APBB1IPQ7Z5R6 666 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-208ENST00000564247 LUZP1Q86V48 1076 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 GAS2L1Q99501 681 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-208ENST00000564247 ACO2Q99798 780 aaKnown RBP18.51■□□□□ 0.55
CMTM3-208ENST00000564247 TARS2Q9BW92 718 aaKnown RBP18.51■□□□□ 0.55
CMTM3-208ENST00000564247 PRDM12Q9H4Q4 367 aa18.51■□□□□ 0.55
CMTM3-208ENST00000564247 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.5■□□□□ 0.55
CMTM3-208ENST00000564247 GOLGA6L3A6NEY3 463 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 ANKRD63C9JTQ0 380 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 GPR182O15218 404 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 CLDN3O15551 220 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 NR3C1P04150 777 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 CDK11BP21127 795 aaKnown RBP18.5■□□□□ 0.55
CMTM3-208ENST00000564247 GARTP22102 1010 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 NR2F2P24468 414 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 AXLP30530 894 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 TAP1Q03518 808 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 ATF7IP2Q5U623 682 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 FAM114A1Q8IWE2 563 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 C12orf56Q8IXR9 622 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 MAFAQ8NHW3 353 aaPredicted RBP18.5■□□□□ 0.55
CMTM3-208ENST00000564247 POMGNT1Q8WZA1 660 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 CEP63Q96MT8 703 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 MED15Q96RN5 788 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 DUSP9Q99956 384 aaKnown RBP18.5■□□□□ 0.55
CMTM3-208ENST00000564247 THAP9Q9H5L6 903 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 FANCLQ9NW38 375 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 MAGEC2Q9UBF1 373 aaPredicted RBP18.5■□□□□ 0.55
CMTM3-208ENST00000564247 ZMYM2Q9UBW7 1377 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 A0A0C4DFX4 3053 aa18.5■□□□□ 0.55
CMTM3-208ENST00000564247 LCHNA4D1U4 455 aa18.49■□□□□ 0.55
CMTM3-208ENST00000564247 KIAA0391O15091 583 aaKnown RBP18.49■□□□□ 0.55
CMTM3-208ENST00000564247 TOM1L1O75674 476 aa18.49■□□□□ 0.55
CMTM3-208ENST00000564247 ARHGEF15O94989 841 aa18.49■□□□□ 0.55
CMTM3-208ENST00000564247 GNA14O95837 355 aa18.49■□□□□ 0.55
CMTM3-208ENST00000564247 HTRA4P83105 476 aaPredicted RBP18.49■□□□□ 0.55
CMTM3-208ENST00000564247 NCAPHQ15003 741 aa18.49■□□□□ 0.55
CMTM3-208ENST00000564247 AMHR2Q16671 573 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms