RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 GPR161Q8N6U8 529 aaKnown RBP16.48■□□□□ 0.23
SCAPER-209ENST00000563919 CNNM3Q8NE01 707 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 FGF14Q92915 247 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 BCO2Q9BYV7 579 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 RNF39Q9H2S5 420 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCAPER-209ENST00000563919 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 SPATA6Q9NWH7 488 aaPredicted RBP16.48■□□□□ 0.23
SCAPER-209ENST00000563919 MIOSQ9NXC5 875 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 FNIP2Q9P278 1114 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 NCDNQ9UBB6 729 aa16.48■□□□□ 0.23
SCAPER-209ENST00000563919 MYH15Q9Y2K3 1946 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 CEP295Q9C0D2 2601 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 CYP3A7-CYP3A51PA0A087WV96 503 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 LAMTOR5O43504 91 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 FSHRP23945 695 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 CYP3A7P24462 503 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 NPEPPSP55786 919 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 PSMC5P62195 406 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 LAMTOR4Q0VGL1 99 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
SCAPER-209ENST00000563919 CCDC148Q8NFR7 591 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 B3GALT6Q96L58 329 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 GAD1Q99259 594 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 COLEC11Q9BWP8 271 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 GPR62Q9BZJ7 368 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 MTF2Q9Y483 593 aaPredicted RBP16.47■□□□□ 0.23
SCAPER-209ENST00000563919 IPPQ9Y573 584 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 PCDHGA2Q9Y5H1 932 aa16.47■□□□□ 0.23
SCAPER-209ENST00000563919 NR1I2O75469 434 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 ZMYND10O75800 440 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 MLH1P40692 756 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 SCNN1GP51170 649 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 EVCP57679 992 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 AKAP17AQ02040 695 aaKnown RBP16.46■□□□□ 0.23
SCAPER-209ENST00000563919 PRKCQQ04759 706 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 CSTF1Q05048 431 aaKnown RBP16.46■□□□□ 0.23
SCAPER-209ENST00000563919 USP41Q3LFD5 358 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 C8orf34Q49A92 452 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 SLC44A4Q53GD3 710 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 GLYCTKQ8IVS8 523 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 ETNPPLQ8TBG4 499 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 TBCKQ8TEA7 893 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 ATRIPQ8WXE1 791 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 PSPC1Q8WXF1 523 aaKnown RBP16.46■□□□□ 0.23
SCAPER-209ENST00000563919 SLC7A3Q8WY07 619 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 TMEM143Q96AN5 459 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 MBOAT7Q96N66 472 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
SCAPER-209ENST00000563919 OSBPL6Q9BZF3 934 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 DHX33Q9H6R0 707 aaKnown RBP16.46■□□□□ 0.23
SCAPER-209ENST00000563919 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 CDH7Q9ULB5 785 aa16.46■□□□□ 0.23
SCAPER-209ENST00000563919 FAM170BA6NMN3 283 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 PRR5-ARHGAP8B1AHC4 643 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 TDP2O95551 362 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 RPL17P18621 184 aaKnown RBP16.45■□□□□ 0.22
SCAPER-209ENST00000563919 ARHGAP8P85298 464 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 UBXN2BQ14CS0 331 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 MLF2Q15773 248 aaPredicted RBP16.45■□□□□ 0.22
SCAPER-209ENST00000563919 NTRK3Q16288 839 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 FUT10Q6P4F1 479 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 CPLX2Q6PUV4 134 aaKnown RBP16.45■□□□□ 0.22
SCAPER-209ENST00000563919 GRASPQ7Z6J2 395 aaPredicted RBP16.45■□□□□ 0.22
SCAPER-209ENST00000563919 EXOC8Q8IYI6 725 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 ZBTB44Q8NCP5 570 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 ZNF274Q96GC6 653 aaPredicted RBP16.45■□□□□ 0.22
SCAPER-209ENST00000563919 ZFP42Q96MM3 310 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 ZSCAN32Q9NX65 697 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 HES2Q9Y543 173 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 NID2Q14112 1375 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 COL4A3Q01955 1670 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
SCAPER-209ENST00000563919 PATJQ8NI35 1801 aa16.45■□□□□ 0.22
SCAPER-209ENST00000563919 EML1O00423 815 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 TGM1P22735 817 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 MAGEA9P43362 315 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 QARSP47897 775 aaKnown RBP16.44■□□□□ 0.22
SCAPER-209ENST00000563919 CREMQ03060 361 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 RSPO2Q6UXX9 243 aaPredicted RBP16.44■□□□□ 0.22
SCAPER-209ENST00000563919 MTSS1LQ765P7 747 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 NELL1Q92832 810 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 SECISBP2LQ93073 1101 aaKnown RBP16.44■□□□□ 0.22
SCAPER-209ENST00000563919 CCDC51Q96ER9 411 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 CEP170P1Q96L14 293 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
SCAPER-209ENST00000563919 EPC1Q9H2F5 836 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 SMG5Q9UPR3 1016 aaKnown RBP16.44■□□□□ 0.22
SCAPER-209ENST00000563919 GIT1Q9Y2X7 761 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 PPME1Q9Y570 386 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 WDFY3Q8IZQ1 3526 aa16.44■□□□□ 0.22
SCAPER-209ENST00000563919 F5P12259 2224 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 CNOT1A5YKK6 2376 aaKnown RBP16.43■□□□□ 0.22
SCAPER-209ENST00000563919 ASAP2O43150 1006 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 TSPAN1O60635 241 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 LILRB5O75023 590 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 ERLIN2O94905 339 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 SEC24BO95487 1268 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 PDIA3P30101 505 aaKnown RBP16.43■□□□□ 0.22
SCAPER-209ENST00000563919 AXLP30530 894 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms