RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 ZSCAN20P17040 1043 aaPredicted RBP29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 RFC2P35250 354 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 CASP4P49662 377 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 OSTNP61366 133 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 CT47A1Q5JQC4 288 aaPredicted RBP29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 LRRC55Q6ZSA7 311 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 LUZP1Q86V48 1076 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 THNSL1Q8IYQ7 743 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 CSGALNACT2Q8N6G5 542 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 CHST12Q9NRB3 414 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 DMAC2Q9NW81 257 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 AGO2Q9UKV8 859 aaKnown RBP29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 HES2Q9Y543 173 aa29.49■■■□□ 2.31
SH3GL3-205ENST00000563901 FAM189A1O60320 539 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 ANK1P16157 1881 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 GARTP22102 1010 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 ADAM9Q13443 819 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 IQCB1Q15051 598 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 SLFN12LQ6IEE8 588 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 C12orf56Q8IXR9 622 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 TMEM192Q8IY95 271 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 RNF214Q8ND24 703 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 BPIFA3Q9BQP9 254 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 ADPGKQ9BRR6 497 aa29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 NXF3Q9H4D5 531 aaKnown RBP29.48■■■□□ 2.31
SH3GL3-205ENST00000563901 TNFSF9P41273 254 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 ACOT2P49753 483 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 SNRPFP62306 86 aaKnown RBP29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 NCAPHQ15003 741 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 CEP135Q66GS9 1140 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 RDH13Q8NBN7 331 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 ENOX1Q8TC92 643 aaKnown RBP29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 FAM213AQ9BRX8 229 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 SRRTQ9BXP5 876 aaKnown RBP29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 CGNQ9P2M7 1197 aaKnown RBP29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 NFE2L3Q9Y4A8 694 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 TRIP11Q15643 1979 aa29.47■■■□□ 2.31
SH3GL3-205ENST00000563901 MCF2P10911 925 aa29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 EPHB4P54760 987 aa29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 MYL5Q02045 173 aa29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 ZC3H3Q8IXZ2 948 aaKnown RBP29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 ANP32EQ9BTT0 268 aa29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 TRIM6Q9C030 488 aaPredicted RBP29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 FAM105AQ9NUU6 356 aa29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 CITO14578 2027 aa29.46■■■□□ 2.31
SH3GL3-205ENST00000563901 FKBP3Q00688 224 aaKnown RBP29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 FPGSQ05932 587 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 NFIL3Q16649 462 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 TPD52L1Q16890 204 aaPredicted RBP29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 SPATA1Q5VX52 437 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 CNKSR3Q6P9H4 555 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 CRELD2Q6UXH1 353 aaPredicted RBP29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 C16orf59Q7L2K0 433 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 CBWD2Q8IUF1 395 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 SLC9A9Q8IVB4 645 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 SMG8Q8ND04 991 aaKnown RBP29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 FAM200AQ8TCP9 573 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 CCDC51Q96ER9 411 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 APOL6Q9BWW8 343 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 SAMSN1Q9NSI8 373 aaKnown RBP29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 PCDHB2Q9Y5E7 798 aa29.45■■■□□ 2.31
SH3GL3-205ENST00000563901 OGTO15294 1046 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 EXOC3O60645 756 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 DCAF4L1Q3SXM0 396 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 XXYLT1Q8NBI6 393 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 APBB2Q92870 758 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 IL23AQ9NPF7 189 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 RGS18Q9NS28 235 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 IPPQ9Y573 584 aa29.45■■■□□ 2.3
SH3GL3-205ENST00000563901 TNRC18O15417 2968 aaPredicted RBP29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 MEIS3P2A8K0S8 358 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 AKAP3O75969 853 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 ADRB2P07550 413 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 RPL13P26373 211 aaKnown RBP29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 FOXR2Q6PJQ5 311 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 GPD1LQ8N335 351 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 FTHL17Q9BXU8 183 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 HSD3B7Q9H2F3 369 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 TSPYL2Q9H2G4 693 aaPredicted RBP29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 RNF39Q9H2S5 420 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 FANCLQ9NW38 375 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 SNTG2Q9NY99 539 aa29.44■■■□□ 2.3
SH3GL3-205ENST00000563901 PTPRSQ13332 1948 aa29.43■■■□□ 2.3
SH3GL3-205ENST00000563901 TULP1O00294 542 aaPredicted RBP29.43■■■□□ 2.3
SH3GL3-205ENST00000563901 LPPQ93052 612 aa29.43■■■□□ 2.3
SH3GL3-205ENST00000563901 RBSNQ9H1K0 784 aa29.43■■■□□ 2.3
SH3GL3-205ENST00000563901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 ENPP3O14638 875 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 CETN3O15182 167 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 MEFVO15553 781 aaPredicted RBP29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 EXTL3O43909 919 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 STAG3L1P0CL83 205 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 PPIGQ13427 754 aaKnown RBP eCLIP29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 IRF2BP1Q8IU81 584 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 RNF169Q8NCN4 708 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 CXCL16Q9H2A7 254 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 RALGAPA2Q2PPJ7 1873 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 C9IYK1 514 aa29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 ATF7P17544 494 aaPredicted RBP29.42■■■□□ 2.3
SH3GL3-205ENST00000563901 AKAP5P24588 427 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms