RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 POMCP01189 267 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 GALTP07902 379 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 MLH1P40692 756 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 ARSHQ5FYA8 562 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 SPECC1Q5M775 1068 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 TMC7Q7Z402 723 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 CDR2LQ86X02 465 aaPredicted RBP14.72□□□□□ -0.05
CLK3-213ENST00000563842 KCNG4Q8TDN1 519 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 GAD1Q99259 594 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 CDCA3Q99618 268 aaPredicted RBP14.72□□□□□ -0.05
CLK3-213ENST00000563842 PARVGQ9HBI0 331 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 ENTPD7Q9NQZ7 604 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 TFIP11Q9UBB9 837 aaKnown RBP14.72□□□□□ -0.05
CLK3-213ENST00000563842 FAN1Q9Y2M0 1017 aa14.72□□□□□ -0.05
CLK3-213ENST00000563842 NT5C1B-RDH14C9J2C7 533 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 CUTAO60888 179 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 CSPG5O95196 566 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 AKAP5P24588 427 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 PBX3P40426 434 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 HYAL1Q12794 435 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 PUS10Q3MIT2 529 aaKnown RBP14.71□□□□□ -0.05
CLK3-213ENST00000563842 NT5DC1Q5TFE4 455 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 EP400NLQ6ZTU2 488 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 USP49Q70CQ1 688 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 SV2BQ7L1I2 683 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 ZNF280BQ86YH2 543 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 IGSF21Q96ID5 467 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 ACO2Q99798 780 aaKnown RBP14.71□□□□□ -0.05
CLK3-213ENST00000563842 TCF25Q9BQ70 676 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 REEP2Q9BRK0 252 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 TLE6Q9H808 572 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 CLDND1Q9NY35 253 aa14.71□□□□□ -0.05
CLK3-213ENST00000563842 NPHP3-ACAD11A0A0J9YXS1 232 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 TTLL13PA6NNM8 815 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 FSCN2O14926 492 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 DDHD2O94830 711 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 KCNA5P22460 613 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 IRS1P35568 1242 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 STAT6P42226 847 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 SLC11A1P49279 550 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 SCNN1GP51170 649 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 ZNF131P52739 623 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 NCKAP1LP55160 1127 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 ERVFC1P60507 584 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 TFF2Q03403 129 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 GRIK3Q13003 919 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 GIT2Q14161 759 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 SMC1AQ14683 1233 aaKnown RBP14.7□□□□□ -0.06
CLK3-213ENST00000563842 COL19A1Q14993 1142 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 DDX53Q86TM3 631 aaKnown RBP14.7□□□□□ -0.06
CLK3-213ENST00000563842 TMEM161BQ8NDZ6 487 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 KCNN1Q92952 543 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 TCHPQ9BT92 498 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 CCDC94Q9BW85 323 aaPredicted RBP14.7□□□□□ -0.06
CLK3-213ENST00000563842 LRRC27Q9C0I9 530 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 ZHX3Q9H4I2 956 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 IGFLR1Q9H665 355 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 SNTG2Q9NY99 539 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 DNAJB4Q9UDY4 337 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 FAM50BQ9Y247 325 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 ATP6V1DQ9Y5K8 247 aa14.7□□□□□ -0.06
CLK3-213ENST00000563842 NRP1O14786 923 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 TRAK2O60296 914 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 EDN1P05305 212 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 SRGAP2BP0DMP2 458 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 MAPTP10636 758 aaKnown RBP14.69□□□□□ -0.06
CLK3-213ENST00000563842 MCF2P10911 925 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 OR1G1P47890 313 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 NRIP1P48552 1158 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 AFF1P51825 1210 aaKnown RBP14.69□□□□□ -0.06
CLK3-213ENST00000563842 YARSP54577 528 aaKnown RBP14.69□□□□□ -0.06
CLK3-213ENST00000563842 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
CLK3-213ENST00000563842 DSC1Q08554 894 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 CTC1Q2NKJ3 1217 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 LEXMQ3ZCV2 418 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 ZNF568Q3ZCX4 644 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 PLPP4Q5VZY2 271 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 EEF1DP3Q658K8 133 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 MPZL3Q6UWV2 235 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 ZPBP2Q6X784 338 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 HAUS6Q7Z4H7 955 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 COLGALT2Q8IYK4 626 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 EFHBQ8N7U6 833 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 TMEM87AQ8NBN3 555 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 LRRC15Q8TF66 581 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 ZFP42Q96MM3 310 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 TARS2Q9BW92 718 aaKnown RBP14.69□□□□□ -0.06
CLK3-213ENST00000563842 COLEC11Q9BWP8 271 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 TOPORSQ9NS56 1045 aaPredicted RBP14.69□□□□□ -0.06
CLK3-213ENST00000563842 MIOSQ9NXC5 875 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 KLK14Q9P0G3 267 aa14.69□□□□□ -0.06
CLK3-213ENST00000563842 PDCD11Q14690 1871 aaKnown RBP14.69□□□□□ -0.06
CLK3-213ENST00000563842 K7ENM7 598 aa14.68□□□□□ -0.06
CLK3-213ENST00000563842 TOM1L1O75674 476 aa14.68□□□□□ -0.06
CLK3-213ENST00000563842 RECQL4O94761 1208 aa14.68□□□□□ -0.06
CLK3-213ENST00000563842 THP07101 528 aa14.68□□□□□ -0.06
CLK3-213ENST00000563842 GRM5P41594 1212 aa14.68□□□□□ -0.06
CLK3-213ENST00000563842 NDUFV1P49821 464 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms