RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SOX13Q9UN79 622 aa5.84□□□□□ -1.47
HERPUD1-207ENST00000563781 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-207ENST00000563781 MYH7BA7E2Y1 1941 aa5.84□□□□□ -1.48
HERPUD1-207ENST00000563781 PLXNA1Q9UIW2 1896 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ELP1O95163 1332 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 SYNRGQ9UMZ2 1314 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GSTTP1A0A1W2PQM5 241 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 MYADML2A6NDP7 307 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 PP2D1A8MPX8 630 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 DDX39AO00148 427 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 LAD1O00515 517 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 DYNC1LI2O43237 492 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GAS7O60861 476 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 PPP6R2O75170 966 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GADD45BO75293 160 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 BAG4O95429 457 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 PARNO95453 639 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 PGK1P00558 417 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GH1P01241 217 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 CCL5P13501 91 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 EPHA1P21709 976 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 MARCKSP29966 332 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 CNGA1P29973 690 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 TXKP42681 527 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GRIA4P48058 902 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GJA9P57773 515 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ACTR2P61160 394 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 KRT85P78386 507 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 PAK2Q13177 524 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 PPP2R5CQ13362 524 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 NEDD9Q14511 834 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 STK38Q15208 465 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 HSDL1Q3SXM5 330 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 AXDND1Q5T1B0 1012 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ARL6IP4Q66PJ3 421 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ABHD15Q6UXT9 468 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 CLEC17AQ6ZS10 378 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 VN1R5Q7Z5H4 357 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 TLK2Q86UE8 772 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ALYREFQ86V81 257 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 FMR1NBQ8N0W7 255 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 IGSF22Q8N9C0 903 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GLIS3Q8NEA6 775 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 KLHDC9Q8NEP7 349 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 OR6J1Q8NGC5 347 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ASAP3Q8TDY4 903 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 AFG1LQ8WV93 481 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 SPATA33Q96N06 139 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 PCYT2Q99447 389 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 GPR20Q99678 358 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 SDF4Q9BRK5 362 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 MMTAG2Q9BU76 263 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 TEKT3Q9BXF9 490 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 C12orf49Q9H741 205 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 TTC12Q9H892 705 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 TBC1D22BQ9NU19 505 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 MAGEC2Q9UBF1 373 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 SLC9A2Q9UBY0 812 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 CEP131Q9UPN4 1083 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 Q9Y3F1 56 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ATP6V1DQ9Y5K8 247 aa5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 SRPRBQ9Y5M8 271 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 ZNFX1Q9P2E3 1918 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-207ENST00000563781 MCM3APO60318 1980 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 A0A096LPE4 126 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 IGKV6D-21A0A0A0MT36 114 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 A0A1W2PPZ6 126 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 VWA3AA6NCI4 1184 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 WDR64B1ANS9 1081 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 LINC01387J3KSC0 135 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 TM4SF5O14894 197 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 SPTLC2O15270 562 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 CHMP2AO43633 222 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 ZNF862O60290 1169 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 MSCO60682 206 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 DNAJC6O75061 913 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 DEAF1O75398 565 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 GJB1P08034 283 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 MMP3P08254 477 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 SUPT20HL2P0C7V6 817 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 RARBP10826 455 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 CST5P28325 142 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 TECP42680 631 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 RAC1P63000 192 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 BEX3Q00994 111 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 SP4Q02446 784 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 LRRC41Q15345 812 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 EPHA7Q15375 998 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 UGCGQ16739 394 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 SPRED3Q2MJR0 410 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 PRRT3Q5FWE3 981 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 NCAPH2Q6IBW4 605 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 CCSAPQ6IQ19 270 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 SHC4Q6S5L8 630 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 DTHD1Q6ZMT9 781 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 USP49Q70CQ1 688 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 SLFN12Q8IYM2 578 aa5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 GIMAP8Q8ND71 665 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-207ENST00000563781 RDM1Q8NG50 284 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms