RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 ADAMTS19Q8TE59 1207 aa16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 ACO2Q99798 780 aaKnown RBP16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 REEP2Q9BRK0 252 aa16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 IRAK3Q9Y616 596 aa16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 MTCL1Q9Y4B5 1905 aaKnown RBP16.31■□□□□ 0.2
RPUSD1-204ENST00000563560 GRXCR2A6NFK2 248 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 C2orf71A6NGG8 1288 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 F8W810 466 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 N4BP3O15049 544 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 NCK2O43639 380 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 LILRB3O75022 631 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 CSPG5O95196 566 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 POMCP01189 267 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 GIT2Q14161 759 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 MCM6Q14566 821 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 ZRSR1Q15695 479 aaKnown RBP16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 DUSP6Q16828 381 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 AAK1Q2M2I8 961 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 TMEM184AQ6ZMB5 413 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 NECAB3Q96P71 396 aaPredicted RBP16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 KANSL3Q9P2N6 904 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 TNFSF13BQ9Y275 285 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 ZDHHC9Q9Y397 364 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 DENND4AQ7Z401 1863 aa16.3■□□□□ 0.2
RPUSD1-204ENST00000563560 H3BQ06 376 aaPredicted RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 NRP1O14786 923 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 SLC16A4O15374 487 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 F13A1P00488 732 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 NRIP1P48552 1158 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 ALDH7A1P49419 539 aaKnown RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 NCBP1Q09161 790 aaKnown RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 RAD51AP2Q09MP3 1159 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 DMP1Q13316 513 aaPredicted RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 XKR4Q5GH76 650 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 ATF7IP2Q5U623 682 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 MRPL43Q8N983 215 aaKnown RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 URGCPQ8TCY9 931 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 CALML4Q96GE6 196 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 HAPLN2Q9GZV7 340 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 CDT1Q9H211 546 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 NGRNQ9NPE2 291 aaKnown RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 KMT5AQ9NQR1 393 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 CLDND1Q9NY35 253 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 ODF2LQ9ULJ1 636 aa16.29■□□□□ 0.2
RPUSD1-204ENST00000563560 C2orf16Q68DN1 1984 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 CARNS1A5YM72 827 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 K7ERI5 159 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 PER2O15055 1255 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 PPP6R2O75170 966 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 RECQL4O94761 1208 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 CTSAP10619 480 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 IL9P15248 144 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 DDIT3P35638 169 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 COASYQ13057 564 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 PLPP4Q5VZY2 271 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 GPBP1Q86WP2 473 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 CEP120Q8N960 986 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 LARP4BQ92615 738 aaKnown RBP16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 CDK5RAP3Q96JB5 506 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 TARS2Q9BW92 718 aaKnown RBP16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 APOL6Q9BWW8 343 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 CD320Q9NPF0 282 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 KLK14Q9P0G3 267 aa16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 RBM19Q9Y4C8 960 aaKnown RBP16.28■□□□□ 0.2
RPUSD1-204ENST00000563560 CCDC169A6NNP5 214 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 FAM189A1O60320 539 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 YEATS4O95619 227 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 PDIA4P13667 645 aaKnown RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 IGFBP6P24592 240 aaPredicted RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 KRT17Q04695 432 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 GRIK3Q13003 919 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 E2F4Q16254 413 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 DCAF4L1Q3SXM0 396 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 CD300LGQ6UXG3 332 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 RBM23Q86U06 439 aaKnown RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 SMRP1Q8NCR6 262 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 DNAJC19Q96DA6 116 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 TMEM169Q96HH4 297 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 ZBTB45Q96K62 511 aaPredicted RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 UHRF1Q96T88 793 aaPredicted RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 CDCA3Q99618 268 aaPredicted RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 PAAF1Q9BRP4 392 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 STRA6Q9BX79 667 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 TRIM6Q9C030 488 aaPredicted RBP16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
RPUSD1-204ENST00000563560 MBTPS2O43462 519 aa16.26■□□□□ 0.19
RPUSD1-204ENST00000563560 PPP1R37O75864 691 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms