RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CYP3A4P08684 503 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 SFPQP23246 707 aaKnown RBP eCLIP8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 NRLP54845 237 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 PTH1RQ03431 593 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 GAS6Q14393 721 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 SART3Q15020 963 aaKnown RBP8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 UNQ6494/PRO21346Q6UXR6 183 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 SMAP1Q8IYB5 467 aaPredicted RBP8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 NCOA7Q8NI08 942 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 URGCPQ8TCY9 931 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 PGBD4Q96DM1 585 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 B3GALT6Q96L58 329 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 SCLT1Q96NL6 688 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 KXD1Q9BQD3 176 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 PHF20Q9BVI0 1012 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 GPR62Q9BZJ7 368 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 HEBP1Q9NRV9 189 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 TBC1D22BQ9NU19 505 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 MIOSQ9NXC5 875 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 FBXW11Q9UKB1 542 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 TRIP11Q15643 1979 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 CNTNAP5Q8WYK1 1306 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 CNTNAP2Q9UHC6 1331 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 NUP205Q92621 2012 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 LOC400499M0QZD8 3231 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 SDK1Q7Z5N4 2213 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 HNRNPA1P09651 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 RPL17P18621 184 aaKnown RBP8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 HOXA9P31269 272 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 PRKCEQ02156 737 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 SRSF5Q13243 272 aaKnown RBP8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 AP3B2Q13367 1082 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 HDAC1Q13547 482 aaPredicted RBP8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 SIM2Q14190 667 aaPredicted RBP8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 PPP1R18Q6NYC8 613 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 ZNF852Q6ZMS4 543 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 PRR23BQ6ZRT6 265 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 TMTC3Q6ZXV5 915 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 HEATR3Q7Z4Q2 680 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 ZNF410Q86VK4 478 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 GLYCTKQ8IVS8 523 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 LENG9Q96B70 501 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 ZNF577Q9BSK1 485 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 MTA3Q9BTC8 594 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 IER2Q9BTL4 223 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 IFT122Q9HBG6 1241 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 ASH1LQ9NR48 2969 aaKnown RBP8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 KANSL3Q9P2N6 904 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 IGSF10Q6WRI0 2623 aa8.7□□□□□ -1.02
HERPUD1-206ENST00000563343 TMEM150BA6NC51 233 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 K7ESF4 209 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 SH2B2O14492 632 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 EDIL3O43854 480 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 FOXD2O60548 495 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 ECI2O75521 394 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 KCNK5O95279 499 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 SEC24BO95487 1268 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 POU2F2P09086 479 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 HOXA11P31270 313 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 ZNF76P36508 570 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 OR1G1P47890 313 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 CCR3P51677 355 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 CDC42EP1Q00587 391 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 SATB1Q01826 763 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 FUT2Q10981 343 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 SF3A2Q15428 464 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 IL31Q6EBC2 164 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 FUT10Q6P4F1 479 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 LRSAM1Q6UWE0 723 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 RALYLQ86SE5 291 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 RAB11FIP4Q86YS3 637 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 KSR1Q8IVT5 923 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 CCDC82Q8N4S0 544 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 FAM160A2Q8N612 972 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 SMG8Q8ND04 991 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 DNASE1L2Q92874 299 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 FAM193BQ96PV7 902 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 NIFKQ9BYG3 293 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 INO80BQ9C086 356 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 NRBP2Q9NSY0 501 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 HCFC1R1Q9NWW0 138 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 STK24Q9Y6E0 443 aa8.69□□□□□ -1.02
HERPUD1-206ENST00000563343 KIAA1549LQ6ZVL6 1849 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 MYO16Q9Y6X6 1858 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 SRRM3A6NNA2 597 aaPredicted RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 WDR64B1ANS9 1081 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 CHURC1-FNTBB4DL54 471 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 CCL16O15467 120 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 PAPSS2O95340 614 aaPredicted RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 C8AP07357 584 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 ZNF806P0C7X5 589 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 CHRNB1P11230 501 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 FCARP24071 287 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 HOXC13P31276 330 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 CNR2P34972 360 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 FNTBP49356 437 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms