RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 MED24O75448 989 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 AKAP5P24588 427 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 PTPN5P54829 565 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 SLC27A1Q6PCB7 646 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 COLEC11Q9BWP8 271 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 RXFP1Q9HBX9 757 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 TEX28O15482 410 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 NR1I2O75469 434 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 NPTXRO95502 500 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 URODP06132 367 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLK3-211ENST00000563297 ZNF174Q15697 407 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 C15orf39Q6ZRI6 1047 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 NACC1Q96RE7 527 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 POLR3CQ9BUI4 534 aaPredicted RBP17.45■□□□□ 0.38
CLK3-211ENST00000563297 CHST7Q9NS84 486 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 KLK14Q9P0G3 267 aa17.45■□□□□ 0.38
CLK3-211ENST00000563297 MTCL1Q9Y4B5 1905 aaKnown RBP17.45■□□□□ 0.38
CLK3-211ENST00000563297 DENND4AQ7Z401 1863 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 LRRIQ4A6NIV6 560 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 ADH1AP07327 375 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 GLUD2P49448 558 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 DSG1Q02413 1049 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 CCDC83Q8IWF9 413 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 MCPH1Q8NEM0 835 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 C8orf76Q96K31 380 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 GPR62Q9BZJ7 368 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 FZD8Q9H461 694 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 MAN1C1Q9NR34 630 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 PRMT7Q9NVM4 692 aaPredicted RBP17.44■□□□□ 0.38
CLK3-211ENST00000563297 PLXNA3P51805 1871 aa17.44■□□□□ 0.38
CLK3-211ENST00000563297 CCDC195A0A1B0GUA6 201 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 TTLL13PA6NNM8 815 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 RPA1P27694 616 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 FAM187BQ17R55 369 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 CDCA2Q69YH5 1023 aaPredicted RBP17.43■□□□□ 0.38
CLK3-211ENST00000563297 CCDC149Q6ZUS6 474 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 OTOP3Q7RTS5 596 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 CMASQ8NFW8 434 aaPredicted RBP17.43■□□□□ 0.38
CLK3-211ENST00000563297 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 ACSF2Q96CM8 615 aaPredicted RBP17.43■□□□□ 0.38
CLK3-211ENST00000563297 PRIMPOLQ96LW4 560 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 LLPHQ9BRT6 129 aaKnown RBP17.43■□□□□ 0.38
CLK3-211ENST00000563297 FOXP1Q9H334 677 aaPredicted RBP17.43■□□□□ 0.38
CLK3-211ENST00000563297 PARP2Q9UGN5 583 aa17.43■□□□□ 0.38
CLK3-211ENST00000563297 MYBP10242 640 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 CYP11B2P19099 503 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 USP41Q3LFD5 358 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 FUT10Q6P4F1 479 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 POTEGQ6S5H5 508 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 FBXO18Q8NFZ0 1043 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 BSNDQ8WZ55 320 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 B3GALT6Q96L58 329 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 ADAM28Q9UKQ2 775 aa17.42■□□□□ 0.38
CLK3-211ENST00000563297 GLUD1P00367 558 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 OR52Z1P0C646 297 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 SPATA31D3P0C874 917 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 GRIK3Q13003 919 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 ORC2Q13416 577 aaPredicted RBP17.41■□□□□ 0.38
CLK3-211ENST00000563297 PADI6Q6TGC4 694 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 CYP26C1Q6V0L0 522 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 SPATA31D4Q6ZUB0 917 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 PALB2Q86YC2 1186 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 ZBTB8OSQ8IWT0 167 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 GPR65Q8IYL9 337 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 C4orf32Q8N8J7 132 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 HDAC7Q8WUI4 952 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 RHOBTB2Q9BYZ6 727 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 FNIP2Q9P278 1114 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 CACNG4Q9UBN1 327 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 DPP7Q9UHL4 492 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 USP20Q9Y2K6 914 aa17.41■□□□□ 0.38
CLK3-211ENST00000563297 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 DOCK6Q96HP0 2047 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 N4BP1O75113 896 aaKnown RBP17.4■□□□□ 0.38
CLK3-211ENST00000563297 TADA2AO75478 443 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 RFPL2O75678 378 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 C1RP00736 705 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 MUTP22033 750 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 NUBP1P53384 320 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 ECM1Q16610 540 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 LILRA6Q6PI73 481 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 PAAF1Q9BRP4 392 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 IRF2BPLQ9H1B7 796 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 C2orf40Q9H1Z8 148 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 CXCL16Q9H2A7 254 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 PDZD7Q9H5P4 517 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 KCNK12Q9HB15 430 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 POLD4Q9HCU8 107 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 WDR6Q9NNW5 1121 aaKnown RBP17.4■□□□□ 0.38
CLK3-211ENST00000563297 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLK3-211ENST00000563297 SNTG2Q9NY99 539 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 DOCK8Q8NF50 2099 aa17.4■□□□□ 0.38
CLK3-211ENST00000563297 ARHGEF35A5YM69 484 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms