RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 DVL2O14641 736 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 CYP27B1O15528 508 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 NARSO43776 548 aaKnown RBP6.19□□□□□ -1.42
SMG1-206ENST00000562668 OPA1O60313 960 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 H2AFYO75367 372 aaKnown RBP6.19□□□□□ -1.42
SMG1-206ENST00000562668 ZNF460Q14592 562 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 BMS1Q14692 1282 aaKnown RBP6.19□□□□□ -1.42
SMG1-206ENST00000562668 DGKDQ16760 1214 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 SGMS1Q86VZ5 419 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 GFM2Q969S9 779 aaKnown RBP6.19□□□□□ -1.42
SMG1-206ENST00000562668 MAML3Q96JK9 1138 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 PLEKHG4BQ96PX9 1271 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 MENTQ9BUN1 341 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 CABP5Q9NP86 173 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 DENND2AQ9ULE3 1009 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 GIT1Q9Y2X7 761 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 TNPO3Q9Y5L0 923 aaKnown RBP6.19□□□□□ -1.42
SMG1-206ENST00000562668 TTC21AQ8NDW8 1320 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.19□□□□□ -1.42
SMG1-206ENST00000562668 PTPDC1A2A3K4 754 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 H7C1D1 291 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 MCM7P33993 719 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 STAT3P40763 770 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 ADCY7P51828 1080 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 ATP2C1P98194 919 aaPredicted RBP6.18□□□□□ -1.42
SMG1-206ENST00000562668 SQSTM1Q13501 440 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 TTC38Q5R3I4 469 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 SREK1Q8WXA9 508 aaKnown RBP6.18□□□□□ -1.42
SMG1-206ENST00000562668 GCDHQ92947 438 aaPredicted RBP6.18□□□□□ -1.42
SMG1-206ENST00000562668 SLC6A15Q9H2J7 730 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 RGS17Q9UGC6 210 aaPredicted RBP6.18□□□□□ -1.42
SMG1-206ENST00000562668 MAGEL2Q9UJ55 1249 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 NWD2Q9ULI1 1742 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 SLIT2O94813 1529 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 LTN1O94822 1766 aa6.18□□□□□ -1.42
SMG1-206ENST00000562668 COL14A1Q05707 1796 aaKnown RBP6.18□□□□□ -1.42
SMG1-206ENST00000562668 NSD3Q9BZ95 1437 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 BCL9LQ86UU0 1499 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 PEAK1Q9H792 1746 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 RGPD5Q99666 1765 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 TRAF5O00463 557 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 FYB1O15117 783 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 TCIRG1Q13488 830 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 EPHA7Q15375 998 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 PIK3R6Q5UE93 754 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 HDGFL2Q7Z4V5 671 aaPredicted RBP6.17□□□□□ -1.42
SMG1-206ENST00000562668 NME9Q86XW9 330 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 AMER2Q8N7J2 671 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 KIAA1958Q8N8K9 716 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 NKD2Q969F2 451 aaPredicted RBP6.17□□□□□ -1.42
SMG1-206ENST00000562668 C16orf92Q96LL3 132 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 ZNF703Q9H7S9 590 aaPredicted RBP6.17□□□□□ -1.42
SMG1-206ENST00000562668 POLR3BQ9NW08 1133 aaPredicted RBP6.17□□□□□ -1.42
SMG1-206ENST00000562668 TERF2IPQ9NYB0 399 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 KCMF1Q9P0J7 381 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 CPDO75976 1380 aa6.17□□□□□ -1.42
SMG1-206ENST00000562668 ABCC6O95255 1503 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 CBX4O00257 560 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 CYP17A1P05093 508 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 BPIFB4P59827 614 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 ADAM8P78325 824 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 CRHR2Q13324 411 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 TUBA3CQ13748 450 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 ZNF174Q15697 407 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 PRAMEF9Q5VWM5 478 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
SMG1-206ENST00000562668 TUBA3EQ6PEY2 450 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 ANKRD35Q8N283 1001 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 HAPLN2Q9GZV7 340 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 PANK3Q9H999 370 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 CEP72Q9P209 647 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 HECAQ9UBI9 543 aaPredicted RBP6.16□□□□□ -1.42
SMG1-206ENST00000562668 B4GALT6Q9UBX8 382 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 SH3BP1Q9Y3L3 701 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 RBM8AQ9Y5S9 174 aaKnown RBP6.16□□□□□ -1.42
SMG1-206ENST00000562668 CAMTA1Q9Y6Y1 1673 aa6.16□□□□□ -1.42
SMG1-206ENST00000562668 C2orf78A6NCI8 922 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 FAM83GA6ND36 823 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 GCP02774 474 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 FLT3P36888 993 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 ANTXR2P58335 489 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 TGFB2P61812 414 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 BMP8AQ7Z5Y6 402 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 TMPRSS6Q8IU80 811 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMG1-206ENST00000562668 SH3TC2Q8TF17 1288 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 ZNF483Q8TF39 744 aaPredicted RBP6.15□□□□□ -1.42
SMG1-206ENST00000562668 MRFAP1L1Q96HT8 127 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 DYDC2Q96IM9 177 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 TUBGCP5Q96RT8 1024 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 GPHA2Q96T91 129 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 TRIM8Q9BZR9 551 aa6.15□□□□□ -1.42
SMG1-206ENST00000562668 KIAA0232Q92628 1395 aa6.15□□□□□ -1.43
SMG1-206ENST00000562668 GLI3P10071 1580 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 MAP2P11137 1827 aaKnown RBP6.14□□□□□ -1.43
SMG1-206ENST00000562668 PTX3P26022 381 aaPredicted RBP6.14□□□□□ -1.43
SMG1-206ENST00000562668 BCAR1P56945 870 aa6.14□□□□□ -1.43
SMG1-206ENST00000562668 RRP1BQ14684 758 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms