RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 AP5M1Q9H0R1 490 aa10.34□□□□□ -0.75
CDH13-205ENST00000562307 HAUS4Q9H6D7 363 aa10.34□□□□□ -0.75
CDH13-205ENST00000562307 IFT122Q9HBG6 1241 aa10.34□□□□□ -0.75
CDH13-205ENST00000562307 DNAJC12Q9UKB3 198 aa10.34□□□□□ -0.75
CDH13-205ENST00000562307 AJAP1Q9UKB5 411 aaPredicted RBP10.34□□□□□ -0.75
CDH13-205ENST00000562307 R3HCC1Q9Y3T6 440 aaKnown RBP10.34□□□□□ -0.75
CDH13-205ENST00000562307 NRCAMQ92823 1304 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 A0A0U1RQJ8 604 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 MBLAC1A4D2B0 266 aaPredicted RBP10.33□□□□□ -0.76
CDH13-205ENST00000562307 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 CLDN3O15551 220 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 KPNA6O60684 536 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
CDH13-205ENST00000562307 GJB1P08034 283 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 CYBAP13498 195 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 AKR1A1P14550 325 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 FERP16591 822 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 STAT1P42224 750 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 PHKA2P46019 1235 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 APLP1P51693 650 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 KIF11P52732 1056 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 NLRP11P59045 1033 aaKnown RBP10.33□□□□□ -0.76
CDH13-205ENST00000562307 IGBP1P78318 339 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 POU5F1Q01860 360 aaKnown RBP10.33□□□□□ -0.76
CDH13-205ENST00000562307 RAPGEF1Q13905 1077 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 SPA17Q15506 151 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 AMHR2Q16671 573 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 MFSD14CQ5VZR4 134 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 GJB7Q6PEY0 223 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 SYT10Q6XYQ8 523 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
CDH13-205ENST00000562307 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 ATRIPQ8WXE1 791 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 ZNF516Q92618 1163 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 CCDC127Q96BQ5 260 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 ZBTB10Q96DT7 871 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 SPAG5Q96R06 1193 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 ARHGAP39Q9C0H5 1083 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 GPR88Q9GZN0 384 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 PRMT7Q9NVM4 692 aaPredicted RBP10.33□□□□□ -0.76
CDH13-205ENST00000562307 MYO1AQ9UBC5 1043 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 GABRQQ9UN88 632 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 TNFSF13BQ9Y275 285 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
CDH13-205ENST00000562307 A0A087WZ62 844 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SMIM35A0A1B0GVV1 85 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 F8VZ95 297 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 OGTO15294 1046 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 PJA2O43164 708 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 AKR1B10O60218 316 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDH13-205ENST00000562307 GFPT2O94808 682 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 IPO7O95373 1038 aaKnown RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 ABL1P00519 1130 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 C4BPAP04003 597 aaKnown RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 SMIM10L2AP0DMW4 78 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SMIM10L2BP0DMW5 78 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 HOXC8P31273 242 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SOX5P35711 763 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 ACOT2P49753 483 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 FLT3LGP49771 235 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 PSEN2P49810 448 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 VAV2P52735 878 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 AP3M2P53677 418 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 GJA9P57773 515 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 GNG11P61952 73 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SP3Q02447 781 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 MAP2K1Q02750 393 aaPredicted RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 KLHL30Q0D2K2 578 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 PRPF4BQ13523 1007 aaKnown RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 MFSD10Q14728 455 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 DRAP1Q14919 205 aaPredicted RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 SURF1Q15526 300 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 KIAA0753Q2KHM9 967 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 ZACNQ401N2 412 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 ARHGAP29Q52LW3 1261 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 ATF7IP2Q5U623 682 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 MPZL3Q6UWV2 235 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SRGAP1Q7Z6B7 1085 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 ZNF410Q86VK4 478 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 BRSK2Q8IWQ3 736 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 FBXL13Q8NEE6 735 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 TRIB2Q92519 343 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SEMA4DQ92854 862 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 NLRP4Q96MN2 994 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 POP1Q99575 1024 aaKnown RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 FDXACB1Q9BRP7 624 aaPredicted RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 SYT11Q9BT88 431 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 UPF3AQ9H1J1 476 aaKnown RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 SETD4Q9NVD3 440 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 RAB20Q9NX57 234 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 CPSF3Q9UKF6 684 aaKnown RBP10.32□□□□□ -0.76
CDH13-205ENST00000562307 PCDHA13Q9Y5I0 950 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 DOCK3Q8IZD9 2030 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 ATP8B3O60423 1300 aa10.32□□□□□ -0.76
CDH13-205ENST00000562307 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
CDH13-205ENST00000562307 INO80B-WBP1J3KQ70 363 aa10.31□□□□□ -0.76
CDH13-205ENST00000562307 FANCGO15287 622 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms