RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 GRM3Q14832 879 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 NRG4Q8WWG1 115 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 RUNDC1Q96C34 613 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 UIMC1Q96RL1 719 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 ADOQ96SZ5 270 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 GPHA2Q96T91 129 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 KRTAP4-11Q9BYQ6 195 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 LIMCH1Q9UPQ0 1083 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 A0A1W2PRX2 142 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 OFD1O75665 1012 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 TOX4O94842 621 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 POU2F2P09086 479 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 U2AF1L5P0DN76 240 aaPredicted RBP8.11□□□□□ -1.11
SMG1-204ENST00000561940 COMTP21964 271 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 EDNRBP24530 442 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 RPS19P39019 145 aaKnown RBP8.11□□□□□ -1.11
SMG1-204ENST00000561940 U2AF1Q01081 240 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMG1-204ENST00000561940 MGAT5Q09328 741 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 MALLQ13021 153 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 ARHGAP29Q52LW3 1261 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 HS1BP3Q53T59 392 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 DGKHQ86XP1 1220 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 GLB1L3Q8NCI6 653 aaPredicted RBP8.11□□□□□ -1.11
SMG1-204ENST00000561940 RABGGTAQ92696 567 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 LPPQ93052 612 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 TAAR9Q96RI9 348 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 SCOCQ9UIL1 159 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 DNM3Q9UQ16 869 aa8.11□□□□□ -1.11
SMG1-204ENST00000561940 UBE2QL1A1L167 161 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 HSPA6P17066 643 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 ACO1P21399 889 aaKnown RBP8.1□□□□□ -1.11
SMG1-204ENST00000561940 AKAP5P24588 427 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 GPR15P49685 360 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 GALEQ14376 348 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 CDSNQ15517 529 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 ANO4Q32M45 955 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 POLNQ7Z5Q5 900 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 GGNQ86UU5 652 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 PIK3C3Q8NEB9 887 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 OR2I1PQ8NGU4 316 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 SLC35G2Q8TBE7 412 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 DPF2Q92785 391 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 ING3Q9NXR8 418 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 RCAN3Q9UKA8 241 aa8.1□□□□□ -1.11
SMG1-204ENST00000561940 HTRA2O43464 458 aaPredicted RBP8.09□□□□□ -1.11
SMG1-204ENST00000561940 CAND2O75155 1236 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 TMEM127O75204 238 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 FSBPO95073 299 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 GAAP10253 952 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 PDCP20941 246 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 SELENOPP49908 381 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 ADAM8P78325 824 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 PPP3CAQ08209 521 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 PUM1Q14671 1186 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG1-204ENST00000561940 MAN2A1Q16706 1144 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 C3orf36Q3SXR2 165 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 CCSAPQ6IQ19 270 aaPredicted RBP8.09□□□□□ -1.11
SMG1-204ENST00000561940 Q6ZSN1 163 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 GRAMD1CQ8IYS0 662 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG1-204ENST00000561940 SH3RF3Q8TEJ3 882 aaPredicted RBP8.09□□□□□ -1.11
SMG1-204ENST00000561940 FATE1Q969F0 183 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 HPS3Q969F9 1004 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 C1QTNF3Q9BXJ4 246 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 OSBPL6Q9BZF3 934 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 NELFAQ9H3P2 528 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 ARNT2Q9HBZ2 717 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 SAP30BPQ9UHR5 308 aaKnown RBP8.09□□□□□ -1.11
SMG1-204ENST00000561940 JAG2Q9Y219 1238 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 IPPQ9Y573 584 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 SLC30A1Q9Y6M5 507 aa8.09□□□□□ -1.11
SMG1-204ENST00000561940 CCDC154A6NI56 674 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 A6NNZ2 444 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 MUSKO15146 869 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 LY86O95711 162 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 KRT18P05783 430 aaKnown RBP8.08□□□□□ -1.12
SMG1-204ENST00000561940 VSIG10L2P0DP72 767 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 XPAP23025 273 aaPredicted RBP8.08□□□□□ -1.12
SMG1-204ENST00000561940 MCAMP43121 646 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 KIR2DL3P43628 341 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 SLC16A1P53985 500 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 GBX1Q14549 363 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 ZXDCQ2QGD7 858 aaPredicted RBP8.08□□□□□ -1.12
SMG1-204ENST00000561940 MUM1L1Q5H9M0 696 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 ATAT1Q5SQI0 421 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 KSR2Q6VAB6 950 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 USP45Q70EL2 814 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 SPRED1Q7Z699 444 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 ADGRE4PQ86SQ3 457 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 SGMS1Q86VZ5 419 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 GLB1L2Q8IW92 636 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 D2HGDHQ8N465 521 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 ZNF808Q8N4W9 903 aaPredicted RBP8.08□□□□□ -1.12
SMG1-204ENST00000561940 ZBTB34Q8NCN2 500 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 DIS3LQ8TF46 1054 aaKnown RBP8.08□□□□□ -1.12
SMG1-204ENST00000561940 ACO2Q99798 780 aaKnown RBP8.08□□□□□ -1.12
SMG1-204ENST00000561940 PRDM11Q9NQV5 511 aa8.08□□□□□ -1.12
SMG1-204ENST00000561940 CHST12Q9NRB3 414 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms