RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 WDR5P61964 334 aaKnown RBP17.17■□□□□ 0.34
SPG7-204ENST00000561911 TYRO3Q06418 890 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 ZCWPW2Q504Y3 356 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 CENPPQ6IPU0 288 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 ARMCX5Q6P1M9 558 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
SPG7-204ENST00000561911 ECHDC2Q86YB7 292 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 C12orf56Q8IXR9 622 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 POMGNT1Q8WZA1 660 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 P2RX5Q93086 422 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 CBWD1Q9BRT8 395 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 MSTO1Q9BUK6 570 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 DACH1Q9UI36 760 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 CTNND2Q9UQB3 1225 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 IPPQ9Y573 584 aa17.17■□□□□ 0.34
SPG7-204ENST00000561911 CALUO43852 315 aaPredicted RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 AMHP03971 560 aa17.16■□□□□ 0.34
SPG7-204ENST00000561911 IBSPP21815 317 aaPredicted RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 CCNE1P24864 410 aa17.16■□□□□ 0.34
SPG7-204ENST00000561911 KCNJ6P48051 423 aa17.16■□□□□ 0.34
SPG7-204ENST00000561911 PAK1Q13153 545 aa17.16■□□□□ 0.34
SPG7-204ENST00000561911 MRPL10Q7Z7H8 261 aaKnown RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 SMG8Q8ND04 991 aaKnown RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 NELFBQ8WX92 580 aa17.16■□□□□ 0.34
SPG7-204ENST00000561911 TSG101Q99816 390 aa17.16■□□□□ 0.34
SPG7-204ENST00000561911 UBE2OQ9C0C9 1292 aaKnown RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 MTIF3Q9H2K0 278 aaKnown RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 NXF3Q9H4D5 531 aaKnown RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 CXXC1Q9P0U4 656 aaPredicted RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 AGO2Q9UKV8 859 aaKnown RBP17.16■□□□□ 0.34
SPG7-204ENST00000561911 KIAA0391O15091 583 aaKnown RBP17.15■□□□□ 0.34
SPG7-204ENST00000561911 CLIC2O15247 247 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 OGTO15294 1046 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 NR3C1P04150 777 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 ATF7P17544 494 aaPredicted RBP17.15■□□□□ 0.34
SPG7-204ENST00000561911 GRM5P41594 1212 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 PMS1P54277 932 aaKnown RBP17.15■□□□□ 0.34
SPG7-204ENST00000561911 DEFB103AP81534 67 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 LRRC63Q05C16 580 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 C9orf50Q5SZB4 431 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 RASIP1Q5U651 963 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 ZNF598Q86UK7 904 aaKnown RBP17.15■□□□□ 0.34
SPG7-204ENST00000561911 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 HACE1Q8IYU2 909 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 CEP120Q8N960 986 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 RNF169Q8NCN4 708 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 ELAC1Q9H777 363 aaKnown RBP17.15■□□□□ 0.34
SPG7-204ENST00000561911 TMEM161AQ9NX61 479 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 HSPBP1Q9NZL4 362 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 HES2Q9Y543 173 aa17.15■□□□□ 0.34
SPG7-204ENST00000561911 BICDL2A1A5D9 508 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 FAM189A1O60320 539 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 EOMESO95936 686 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 STAG3L1P0CL83 205 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 ITGA4P13612 1032 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 CYP2J2P51589 502 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 STX17P56962 302 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 MYBPC2Q14324 1141 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 NFIL3Q16649 462 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 KYAT1Q16773 422 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 CT47A1Q5JQC4 288 aaPredicted RBP17.14■□□□□ 0.33
SPG7-204ENST00000561911 ZBTB41Q5SVQ8 909 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 ANKRD40Q6AI12 368 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 FOXR2Q6PJQ5 311 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 NPAS4Q8IUM7 802 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 SLC9A9Q8IVB4 645 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 CRIPAKQ8N1N5 446 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 TMEM174Q8WUU8 243 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 PGBD4Q96DM1 585 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 SAAL1Q96ER3 474 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
SPG7-204ENST00000561911 FUCA2Q9BTY2 467 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
SPG7-204ENST00000561911 APOL6Q9BWW8 343 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 GZF1Q9H116 711 aaPredicted RBP17.14■□□□□ 0.33
SPG7-204ENST00000561911 RNF39Q9H2S5 420 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
SPG7-204ENST00000561911 SNTG2Q9NY99 539 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 RWDD2AQ9UIY3 292 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 SLC4A7Q9Y6M7 1214 aa17.14■□□□□ 0.33
SPG7-204ENST00000561911 EXTL3O43909 919 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 CLTAP09496 248 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
SPG7-204ENST00000561911 BMP8BP34820 402 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 OSTNP61366 133 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 SHHQ15465 462 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 SEZ6Q53EL9 994 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 TTI2Q6NXR4 508 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 C11orf57Q6ZUT1 292 aaPredicted RBP17.13■□□□□ 0.33
SPG7-204ENST00000561911 GPD1LQ8N335 351 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 ZSWIM2Q8NEG5 633 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 LPPQ93052 612 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms