RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 NPTXRO95502 500 aa28■■■□□ 2.07
NME3-202ENST00000561637 SMC1AQ14683 1233 aaKnown RBP28■■■□□ 2.07
NME3-202ENST00000561637 MCPH1Q8NEM0 835 aa28■■■□□ 2.07
NME3-202ENST00000561637 FEZF2Q8TBJ5 459 aa28■■■□□ 2.07
NME3-202ENST00000561637 CASP10Q92851 521 aa28■■■□□ 2.07
NME3-202ENST00000561637 KIFC3Q9BVG8 833 aa28■■■□□ 2.07
NME3-202ENST00000561637 NFKBIZQ9BYH8 718 aa28■■■□□ 2.07
NME3-202ENST00000561637 ADAM7Q9H2U9 754 aa28■■■□□ 2.07
NME3-202ENST00000561637 CLASP2O75122 1294 aaKnown RBP27.99■■■□□ 2.07
NME3-202ENST00000561637 CXCL14O95715 111 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 CYP11B2P19099 503 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 AKAP5P24588 427 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 AXLP30530 894 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 SCNN1GP51170 649 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 CDCA2Q69YH5 1023 aaPredicted RBP27.99■■■□□ 2.07
NME3-202ENST00000561637 SNX29Q8TEQ0 813 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 CCDC51Q96ER9 411 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 BHMT2Q9H2M3 363 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.99■■■□□ 2.07
NME3-202ENST00000561637 KIAA1024Q9UPX6 916 aa27.99■■■□□ 2.07
NME3-202ENST00000561637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.98■■■□□ 2.07
NME3-202ENST00000561637 ARL5CA6NH57 179 aa27.98■■■□□ 2.07
NME3-202ENST00000561637 TPRNQ4KMQ1 711 aa27.98■■■□□ 2.07
NME3-202ENST00000561637 CES5AQ6NT32 575 aa27.98■■■□□ 2.07
NME3-202ENST00000561637 KANK3Q6NY19 840 aa27.98■■■□□ 2.07
NME3-202ENST00000561637 FRMD5Q7Z6J6 570 aa27.98■■■□□ 2.07
NME3-202ENST00000561637 DDX53Q86TM3 631 aaKnown RBP27.98■■■□□ 2.07
NME3-202ENST00000561637 IGSF22Q8N9C0 903 aa27.98■■■□□ 2.07
NME3-202ENST00000561637 UPF2Q9HAU5 1272 aaKnown RBP27.98■■■□□ 2.07
NME3-202ENST00000561637 DDX19AQ9NUU7 478 aaKnown RBP27.98■■■□□ 2.07
NME3-202ENST00000561637 MARCH5Q9NX47 278 aa27.98■■■□□ 2.07
NME3-202ENST00000561637 PRG3Q9Y2Y8 225 aaPredicted RBP27.98■■■□□ 2.07
NME3-202ENST00000561637 SSBP05455 408 aaKnown RBP eCLIP27.97■■■□□ 2.07
NME3-202ENST00000561637 LIG1P18858 919 aa27.97■■■□□ 2.07
NME3-202ENST00000561637 HAUS3Q68CZ6 603 aa27.97■■■□□ 2.07
NME3-202ENST00000561637 ASTLQ6HA08 431 aaPredicted RBP27.97■■■□□ 2.07
NME3-202ENST00000561637 KCNK18Q7Z418 384 aa27.97■■■□□ 2.07
NME3-202ENST00000561637 C12orf76Q8N812 135 aaPredicted RBP27.97■■■□□ 2.07
NME3-202ENST00000561637 NECTIN4Q96NY8 510 aa27.97■■■□□ 2.07
NME3-202ENST00000561637 MMTAG2Q9BU76 263 aaKnown RBP27.97■■■□□ 2.07
NME3-202ENST00000561637 KLK14Q9P0G3 267 aa27.97■■■□□ 2.07
NME3-202ENST00000561637 DENND4AQ7Z401 1863 aa27.97■■■□□ 2.07
NME3-202ENST00000561637 E9PMD0 336 aa27.96■■■□□ 2.07
NME3-202ENST00000561637 NRP1O14786 923 aa27.96■■■□□ 2.07
NME3-202ENST00000561637 ITIH3Q06033 890 aa27.96■■■□□ 2.07
NME3-202ENST00000561637 PCBP1Q15365 356 aaKnown RBP eCLIP27.96■■■□□ 2.07
NME3-202ENST00000561637 CXCL16Q9H2A7 254 aa27.96■■■□□ 2.07
NME3-202ENST00000561637 FZD8Q9H461 694 aa27.96■■■□□ 2.07
NME3-202ENST00000561637 CACNG4Q9UBN1 327 aa27.96■■■□□ 2.07
NME3-202ENST00000561637 LIMD1Q9UGP4 676 aa27.96■■■□□ 2.07
NME3-202ENST00000561637 A0A1B0GUA9 196 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 INPPL1O15357 1258 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 CTSAP10619 480 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 RARS2Q5T160 578 aaKnown RBP27.95■■■□□ 2.06
NME3-202ENST00000561637 PPP4R3CPQ6ZMV5 832 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 TAS1R1Q7RTX1 841 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 COLGALT2Q8IYK4 626 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 CNNM3Q8NE01 707 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 GSTCDQ8NEC7 633 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 RSPH1Q8WYR4 309 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 FAM193BQ96PV7 902 aaPredicted RBP27.95■■■□□ 2.06
NME3-202ENST00000561637 TRIM6Q9C030 488 aaPredicted RBP27.95■■■□□ 2.06
NME3-202ENST00000561637 CCDC113Q9H0I3 377 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 PDZD7Q9H5P4 517 aa27.95■■■□□ 2.06
NME3-202ENST00000561637 EPCAMP16422 314 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 PTPN14Q15678 1187 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 EEF1DP3Q658K8 133 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 SLC27A1Q6PCB7 646 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 RABGGTAQ92696 567 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 TMEM175Q9BSA9 504 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 FAN1Q9Y2M0 1017 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 WDR87Q6ZQQ6 2873 aa27.94■■■□□ 2.06
NME3-202ENST00000561637 PRKCBP05771 671 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 MTHFRP42898 656 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 OR1G1P47890 313 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 DSC1Q08554 894 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 NCBP1Q09161 790 aaKnown RBP27.93■■■□□ 2.06
NME3-202ENST00000561637 PDIA5Q14554 519 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 ZBTB8OSQ8IWT0 167 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 NKD2Q969F2 451 aaPredicted RBP27.93■■■□□ 2.06
NME3-202ENST00000561637 RUSC1Q9BVN2 902 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 PRMT7Q9NVM4 692 aaPredicted RBP27.93■■■□□ 2.06
NME3-202ENST00000561637 KANSL3Q9P2N6 904 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 SMC3Q9UQE7 1217 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 KIF3AQ9Y496 699 aa27.93■■■□□ 2.06
NME3-202ENST00000561637 GVINP1Q7Z2Y8 2422 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 H3BQV1 296 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 MUTP22033 750 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 ATP2C1P98194 919 aaPredicted RBP27.92■■■□□ 2.06
NME3-202ENST00000561637 CWF19L1Q69YN2 538 aaKnown RBP27.92■■■□□ 2.06
NME3-202ENST00000561637 ZDHHC14Q8IZN3 488 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 DAW1Q8N136 415 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 TDRD5Q8NAT2 981 aaKnown RBP27.92■■■□□ 2.06
NME3-202ENST00000561637 DEPTORQ8TB45 409 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 MFSD1Q9H3U5 465 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 PARP2Q9UGN5 583 aa27.92■■■□□ 2.06
NME3-202ENST00000561637 C2orf16Q68DN1 1984 aa27.91■■■□□ 2.06
NME3-202ENST00000561637 TDRD15B5MCY1 1934 aaKnown RBP27.91■■■□□ 2.06
NME3-202ENST00000561637 ALDH2P05091 517 aa27.91■■■□□ 2.06
NME3-202ENST00000561637 PRPHP41219 470 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms