RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 COLGALT2Q8IYK4 626 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 SPIRE2Q8WWL2 714 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 MSLNLQ96KJ4 702 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 NECAB3Q96P71 396 aaPredicted RBP17.05■□□□□ 0.32
CCDC113-203ENST00000561517 ADPGKQ9BRR6 497 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 KCNG1Q9UIX4 513 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
CCDC113-203ENST00000561517 USP20Q9Y2K6 914 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 SRPRBQ9Y5M8 271 aaKnown RBP17.05■□□□□ 0.32
CCDC113-203ENST00000561517 SFI1A8K8P3 1242 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 HIDE1A8MVS5 230 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 NRP1O14786 923 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 PER2O15055 1255 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 PDIA4P13667 645 aaKnown RBP17.04■□□□□ 0.32
CCDC113-203ENST00000561517 PLCG1P19174 1290 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 MARCKSP29966 332 aaPredicted RBP17.04■□□□□ 0.32
CCDC113-203ENST00000561517 KCNC3Q14003 757 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 SMC1AQ14683 1233 aaKnown RBP17.04■□□□□ 0.32
CCDC113-203ENST00000561517 SLC39A14Q15043 492 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 KARSQ15046 597 aaKnown RBP17.04■□□□□ 0.32
CCDC113-203ENST00000561517 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 ARSHQ5FYA8 562 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 ATF7IP2Q5U623 682 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 VPS52Q8N1B4 723 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 MRPL43Q8N983 215 aaKnown RBP17.04■□□□□ 0.32
CCDC113-203ENST00000561517 USP28Q96RU2 1077 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 KMT5AQ9NQR1 393 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 CLEC1BQ9P126 229 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 PARP2Q9UGN5 583 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 FAN1Q9Y2M0 1017 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 IRAK3Q9Y616 596 aa17.04■□□□□ 0.32
CCDC113-203ENST00000561517 C2orf71A6NGG8 1288 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 CTSAP10619 480 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 PLS3P13797 630 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 IL9P15248 144 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 NDUFV1P49821 464 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 BMS1Q14692 1282 aaKnown RBP17.03■□□□□ 0.32
CCDC113-203ENST00000561517 DCAF4L1Q3SXM0 396 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 TMEM184AQ6ZMB5 413 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 USP49Q70CQ1 688 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 VN1R2Q8NFZ6 395 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 RAD54LQ92698 747 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 ACO2Q99798 780 aaKnown RBP17.03■□□□□ 0.32
CCDC113-203ENST00000561517 STK39Q9UEW8 545 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 CD207Q9UJ71 328 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 ODF2LQ9ULJ1 636 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 FAM50BQ9Y247 325 aa17.03■□□□□ 0.32
CCDC113-203ENST00000561517 NPHP3-ACAD11A0A0J9YXS1 232 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 SLC16A4O15374 487 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 MBTPS2O43462 519 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
CCDC113-203ENST00000561517 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.32
CCDC113-203ENST00000561517 GRIK3Q13003 919 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 COASYQ13057 564 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 SMAD4Q13485 552 aaKnown RBP17.02■□□□□ 0.32
CCDC113-203ENST00000561517 MCM6Q14566 821 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 GPBP1Q86WP2 473 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 KCNN1Q92952 543 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 MRPL4Q9BYD3 311 aaKnown RBP17.02■□□□□ 0.32
CCDC113-203ENST00000561517 PTPRHQ9HD43 1115 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 MARCH5Q9NX47 278 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 SNTG2Q9NY99 539 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 KLK14Q9P0G3 267 aa17.02■□□□□ 0.32
CCDC113-203ENST00000561517 PDCD11Q14690 1871 aaKnown RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 RECQL4O94761 1208 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 CXCL14O95715 111 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 EFEMP2O95967 443 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 PROZP22891 400 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 SMTNP53814 917 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 RBM10P98175 930 aaKnown RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 GIT2Q14161 759 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 SMAD2Q15796 467 aaKnown RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 RNF168Q8IYW5 571 aaPredicted RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 RASSF8Q8NHQ8 419 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 LARP4BQ92615 738 aaKnown RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 RPS6KC1Q96S38 1066 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
CCDC113-203ENST00000561517 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 BARX2Q9UMQ3 279 aaPredicted RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 PRG3Q9Y2Y8 225 aaPredicted RBP17.01■□□□□ 0.31
CCDC113-203ENST00000561517 MTCL1Q9Y4B5 1905 aaKnown RBP17■□□□□ 0.31
CCDC113-203ENST00000561517 ABLIM1O14639 778 aa17■□□□□ 0.31
CCDC113-203ENST00000561517 PTGESO14684 152 aa17■□□□□ 0.31
CCDC113-203ENST00000561517 MAPTP10636 758 aaKnown RBP17■□□□□ 0.31
CCDC113-203ENST00000561517 DDIT3P35638 169 aa17■□□□□ 0.31
CCDC113-203ENST00000561517 OR1G1P47890 313 aa17■□□□□ 0.31
CCDC113-203ENST00000561517 ZNF131P52739 623 aa17■□□□□ 0.31
CCDC113-203ENST00000561517 NCKAP1LP55160 1127 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms