RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 C2CD2LO14523 706 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 NPTXRO95502 500 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 URODP06132 367 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 CYP11B2P19099 503 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 FAM187BQ17R55 369 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 KIAA0319Q5VV43 1072 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 PADI6Q6TGC4 694 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 FBXL6Q8N531 539 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 KREMEN2Q8NCW0 462 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 COLEC11Q9BWP8 271 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 PRMT7Q9NVM4 692 aaPredicted RBP17.95■□□□□ 0.46
SNX1-213ENST00000561026 USTQ9Y2C2 406 aa17.95■□□□□ 0.46
SNX1-213ENST00000561026 ARHGEF35A5YM69 484 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 F8W810 466 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 MUTP22033 750 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 NHLH1Q02575 133 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 GNL2Q13823 731 aaKnown RBP17.94■□□□□ 0.46
SNX1-213ENST00000561026 GPR149Q86SP6 731 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 SUGP1Q8IWZ8 645 aaKnown RBP17.94■□□□□ 0.46
SNX1-213ENST00000561026 ZDHHC14Q8IZN3 488 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 C4orf32Q8N8J7 132 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 FEZF2Q8TBJ5 459 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 BSNDQ8WZ55 320 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 C2orf40Q9H1Z8 148 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 PARP2Q9UGN5 583 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 ZMYM2Q9UBW7 1377 aa17.94■□□□□ 0.46
SNX1-213ENST00000561026 TEX28O15482 410 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 ADH1AP07327 375 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.464e-14■■■■□ 21.1
SNX1-213ENST00000561026 GLUD2P49448 558 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 FXR2P51116 673 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX1-213ENST00000561026 DSG1Q02413 1049 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 C8orf34Q49A92 452 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 IER5LQ5T953 404 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 HAUS3Q68CZ6 603 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 TDRD5Q8NAT2 981 aaKnown RBP17.93■□□□□ 0.46
SNX1-213ENST00000561026 RXFP1Q9HBX9 757 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 CHST7Q9NS84 486 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 KLK14Q9P0G3 267 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 NOL7Q9UMY1 257 aaKnown RBP17.93■□□□□ 0.46
SNX1-213ENST00000561026 SORCS3Q9UPU3 1222 aa17.93■□□□□ 0.46
SNX1-213ENST00000561026 SPDYE4A6NLX3 237 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 NAMPTP43490 491 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 GRIK3Q13003 919 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 MTMR3Q13615 1198 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 NBR1Q14596 966 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 ECM1Q16610 540 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 MAPK6Q16659 721 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 C15orf39Q6ZRI6 1047 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 UBALD2Q8IYN6 164 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 GPR62Q9BZJ7 368 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 PDZD7Q9H5P4 517 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 LIMD1Q9UGP4 676 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 MYO10Q9HD67 2058 aa17.92■□□□□ 0.46
SNX1-213ENST00000561026 ACKR2O00590 384 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 N4BP3O15049 544 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 BRD1O95696 1058 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 CCT6AP40227 531 aaKnown RBP17.91■□□□□ 0.46
SNX1-213ENST00000561026 TOB1P50616 345 aaPredicted RBP17.91■□□□□ 0.46
SNX1-213ENST00000561026 PRPF4BQ13523 1007 aaKnown RBP17.91■□□□□ 0.46
SNX1-213ENST00000561026 PDIA5Q14554 519 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 ALYREFQ86V81 257 aaKnown RBP17.91■□□□□ 0.46
SNX1-213ENST00000561026 CMASQ8NFW8 434 aaPredicted RBP17.91■□□□□ 0.46
SNX1-213ENST00000561026 DEPTORQ8TB45 409 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 CCDC113Q9H0I3 377 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 BHMT2Q9H2M3 363 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 MAN1C1Q9NR34 630 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 LRWD1Q9UFC0 647 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 DPP7Q9UHL4 492 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 GLUD1P00367 558 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 PRKCBP05771 671 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 ASGR2P07307 311 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 PTGDRQ13258 359 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 PPP2R5AQ15172 486 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 USP41Q3LFD5 358 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 FUT10Q6P4F1 479 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 CCDC149Q6ZUS6 474 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 GPR65Q8IYL9 337 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 RABGGTAQ92696 567 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 B3GALT6Q96L58 329 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 PRRX2Q99811 253 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 ADAM28Q9UKQ2 775 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 KIAA1024Q9UPX6 916 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 USP20Q9Y2K6 914 aa17.91■□□□□ 0.46
SNX1-213ENST00000561026 TDRD15B5MCY1 1934 aaKnown RBP17.9■□□□□ 0.46
SNX1-213ENST00000561026 C1RP00736 705 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 CENPBP07199 599 aaPredicted RBP17.9■□□□□ 0.46
SNX1-213ENST00000561026 TUSC3Q13454 348 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 TMEM132AQ24JP5 1023 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 ELMSAN1Q6PJG2 1045 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 OTOP3Q7RTS5 596 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 IGSF22Q8N9C0 903 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 PRSS33Q8NF86 280 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 KIFAP3Q92845 792 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 ACSF2Q96CM8 615 aaPredicted RBP17.9■□□□□ 0.46
SNX1-213ENST00000561026 ADPGKQ9BRR6 497 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 RAB34Q9BZG1 259 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms