RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 LRRC43Q8N309 656 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 C12orf76Q8N812 135 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 NECAB1Q8N987 351 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 DAGLBQ8NCG7 672 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 TMEM143Q96AN5 459 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 MBOAT7Q96N66 472 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 UCN2Q96RP3 112 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 POP1Q99575 1024 aaKnown RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 NIFKQ9BYG3 293 aaKnown RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 S1PR5Q9H228 398 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 MINDY3Q9H8M7 445 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 SPG21Q9NZD8 308 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 RGL1Q9NZL6 768 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 SUCLA2Q9P2R7 463 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 DNAJB4Q9UDY4 337 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 VAV3Q9UKW4 847 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 TPCN1Q9ULQ1 816 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 PIN4Q9Y237 131 aaKnown RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 FAM186AA6NE01 2351 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CYP3A7-CYP3A51PA0A087WV96 503 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 IGKV6-21A0A0C4DH24 114 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 A0A0U1RQF3 1178 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 TMEM221A6NGB7 291 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 C2orf71A6NGG8 1288 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 J3QL48 77 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 M0R296 226 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CLASP2O75122 1294 aaKnown RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 PDGFBP01127 241 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 SSBP05455 408 aaKnown RBP eCLIP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 MYBP10242 640 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CYP3A7P24462 503 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 GRM5P41594 1212 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 PHKA2P46019 1235 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 ZXDAP98168 799 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 PLCB3Q01970 1234 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 NHLH1Q02575 133 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CYP4A11Q02928 519 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 NNTQ13423 1086 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CTTNQ14247 550 aaKnown RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CBX2Q14781 532 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 XKR3Q5GH77 459 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 RARS2Q5T160 578 aaKnown RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 NCAPH2Q6IBW4 605 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 PIK3AP1Q6ZUJ8 805 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CCDC116Q8IYX3 515 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 SUSD6Q92537 303 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 EDAQ92838 391 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 HAS1Q92839 578 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 ZNF274Q96GC6 653 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 PHF20Q9BVI0 1012 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 PHF7Q9BWX1 381 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 VN1R3Q9BXE9 311 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 GCOM2Q9BZD3 368 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 SLKQ9H2G2 1235 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 NRDE2Q9H7Z3 1164 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CYP26B1Q9NR63 512 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 RIF1Q5UIP0 2472 aaKnown RBP8.1□□□□□ -1.11
GABPB1-211ENST00000561010 CACNA1IQ9P0X4 2223 aa8.1□□□□□ -1.11
GABPB1-211ENST00000561010 PTPRZ1P23471 2315 aaPredicted RBP8.09□□□□□ -1.11
GABPB1-211ENST00000561010 FANCMQ8IYD8 2048 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 CCDC194A0A1B0GVG4 234 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 CCNT1O60563 726 aaKnown RBP8.09□□□□□ -1.11
GABPB1-211ENST00000561010 MAFO75444 373 aaPredicted RBP8.09□□□□□ -1.11
GABPB1-211ENST00000561010 CXCL14O95715 111 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 SRGAP2CP0DJJ0 459 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 SKIP12755 728 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 EPCAMP16422 314 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 SLC11A1P49279 550 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 MRE11P49959 708 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 VCPP55072 806 aaKnown RBP8.09□□□□□ -1.11
GABPB1-211ENST00000561010 PSMC5P62195 406 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 KRT17Q04695 432 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 CATSPER4Q7RTX7 472 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 KRT25Q7Z3Z0 450 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 ZNF280BQ86YH2 543 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 VPS52Q8N1B4 723 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 PRSS33Q8NF86 280 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 RDM1Q8NG50 284 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 PBXIP1Q96AQ6 731 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 DYDC2Q96IM9 177 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 TM6SF1Q9BZW5 370 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 POMKQ9H5K3 350 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 IFT122Q9HBG6 1241 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 KCNMB3Q9NPA1 279 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 FAM105AQ9NUU6 356 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 TBC1D13Q9NVG8 400 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 FAM86C1Q9NVL1 165 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 ORC3Q9UBD5 711 aaPredicted RBP8.09□□□□□ -1.11
GABPB1-211ENST00000561010 PUF60Q9UHX1 559 aaKnown RBP8.09□□□□□ -1.11
GABPB1-211ENST00000561010 LZTS1Q9Y250 596 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 HCFC2Q9Y5Z7 792 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 WDR87Q6ZQQ6 2873 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 TCHHQ07283 1943 aa8.09□□□□□ -1.11
GABPB1-211ENST00000561010 ZFHX2Q9C0A1 2572 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-211ENST00000561010 KIF26AQ9ULI4 1882 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-211ENST00000561010 COL4A3Q01955 1670 aa8.08□□□□□ -1.12
GABPB1-211ENST00000561010 VPS13AQ96RL7 3174 aa8.08□□□□□ -1.12
GABPB1-211ENST00000561010 ZNF638Q14966 1978 aaKnown RBP8.08□□□□□ -1.12
GABPB1-211ENST00000561010 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.08□□□□□ -1.12
GABPB1-211ENST00000561010 C2CD4DB7Z1M9 353 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms