RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 CT47A1Q5JQC4 288 aaPredicted RBP6.06□□□□□ -1.44
ZEB1-220ENST00000560909 EFHC2Q5JST6 749 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 PLA2G4FQ68DD2 849 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 FOXR2Q6PJQ5 311 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 CXCL17Q6UXB2 119 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 UNC13DQ70J99 1090 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 GPBP1Q86WP2 473 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 GRAMD1CQ8IYS0 662 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 TRIML1Q8N9V2 468 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 MCPH1Q8NEM0 835 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 LRRN4Q8WUT4 740 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 TMEM174Q8WUU8 243 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 KIFAP3Q92845 792 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 SYAP1Q96A49 352 aaPredicted RBP6.06□□□□□ -1.44
ZEB1-220ENST00000560909 CEP170P1Q96L14 293 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 DEFB118Q96PH6 123 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 JPH2Q9BR39 696 aaPredicted RBP6.06□□□□□ -1.44
ZEB1-220ENST00000560909 REEP2Q9BRK0 252 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 MCOLN1Q9GZU1 580 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 RNF208Q9H0X6 261 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 OLFML3Q9NRN5 406 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 SEL1LQ9UBV2 794 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 KCNG1Q9UIX4 513 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 COL4A3BPQ9Y5P4 624 aa6.06□□□□□ -1.44
ZEB1-220ENST00000560909 SMIM35A0A1B0GVV1 85 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 KIAA1324LA8MWY0 1029 aaPredicted RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 PRRG2O14669 202 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 ASAP2O43150 1006 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 SMC2O95347 1197 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 RPN1P04843 607 aaKnown RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 RPLP2P05387 115 aaKnown RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 MYL3P08590 195 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 GNAT1P11488 350 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 GAP43P17677 238 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 KLRC1P26715 233 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 AFMP43652 599 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 MCCD1P59942 119 aaPredicted RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 CDC42EP1Q00587 391 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 RBL2Q08999 1139 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 PPFIA1Q13136 1202 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 PNOCQ13519 176 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 EMC2Q15006 297 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 ZRSR1Q15695 479 aaKnown RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 BMT2Q1RMZ1 405 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 TRIM71Q2Q1W2 868 aaKnown RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 NBPF20Q3BBV1 942 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 ZSCAN23Q3MJ62 389 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 IER5Q5VY09 327 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 CAVIN1Q6NZI2 390 aaKnown RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 MTHFD1LQ6UB35 978 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 EPM2AIP1Q7L775 607 aaPredicted RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 ZBTB33Q86T24 672 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 SERINC5Q86VE9 423 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 KIAA0319LQ8IZA0 1049 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 NME8Q8N427 588 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 RASSF8Q8NHQ8 419 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 U2AF1L4Q8WU68 220 aaKnown RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 LMBR1Q8WVP7 490 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 SLC7A3Q8WY07 619 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 STAMQ92783 540 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 DRC1Q96MC2 740 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 TOX2Q96NM4 488 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 NFKBIZQ9BYH8 718 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 ATP6V0A4Q9HBG4 840 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 PARVGQ9HBI0 331 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 AVENQ9NQS1 362 aaPredicted RBP6.05□□□□□ -1.44
ZEB1-220ENST00000560909 HDAC6Q9UBN7 1215 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 GTF2IRD1Q9UHL9 959 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 MAN1B1Q9UKM7 699 aa6.05□□□□□ -1.44
ZEB1-220ENST00000560909 NPHP3-ACAD11A0A0J9YXS1 232 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 A0A1B0GTH6 734 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
ZEB1-220ENST00000560909 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 RSPH10B2B2RC85 870 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 ARVCFO00192 962 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 HIP1RO75146 1068 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 CAND2O75155 1236 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 CD4P01730 458 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 RSPH10BP0C881 870 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 PLS3P13797 630 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 GLRA2P23416 452 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 MARK3P27448 753 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 CASP1P29466 404 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 HOXD13P35453 343 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 NCKAP1LP55160 1127 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 ASIC1P78348 528 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 GTF2BQ00403 316 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 KRTAP1-1Q07627 177 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 TBC1D8BQ0IIM8 1120 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 STK4Q13043 487 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 COASYQ13057 564 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 DRP2Q13474 957 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 ITGA7Q13683 1181 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 MXD4Q14582 209 aaPredicted RBP6.04□□□□□ -1.44
ZEB1-220ENST00000560909 NR6A1Q15406 480 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 CAMK4Q16566 473 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 MTERF2Q49AM1 385 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 FAM26DQ5JW98 314 aa6.04□□□□□ -1.44
ZEB1-220ENST00000560909 ZNF658Q5TYW1 1059 aaPredicted RBP6.04□□□□□ -1.44
ZEB1-220ENST00000560909 CDCA2Q69YH5 1023 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms