RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 SGPL1O95470 568 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 SLC25A27O95847 323 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 TXNP10599 105 aaKnown RBP15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 CETN1Q12798 172 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 SLC47A2Q86VL8 602 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 VPS36Q86VN1 386 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 GPD1LQ8N335 351 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 MSANTD4Q8NCY6 345 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 HDAC7Q8WUI4 952 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 PRPF31Q8WWY3 499 aaKnown RBP15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 TATDN2Q93075 761 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 ARHGEF26Q96DR7 871 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 GPR20Q99678 358 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 RAB21Q9UL25 225 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 BTBD19C9JJ37 291 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 ATMINO43313 823 aaPredicted RBP15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 STRN3Q13033 797 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 TUBB2AQ13885 445 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 SPOPLQ6IQ16 392 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 ZBTB33Q86T24 672 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 HNRNPLLQ8WVV9 542 aaKnown RBP15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 TUBB2BQ9BVA1 445 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 DNAJC25-GNG10A0A024R161 153 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 CCL15-CCL14A0A0B4J2E2 113 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 H2AFZP0C0S5 128 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 CCL15Q16663 113 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 CCDC181Q5TID7 509 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 KRT39Q6A163 491 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 H2AFVQ71UI9 128 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 ZNF516Q92618 1163 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 C17orf75Q9HAS0 396 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 ABCB6Q9NP58 842 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 CALCOCO1Q9P1Z2 691 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 HTTP42858 3142 aa15.23■□□□□ 0.03
CARMIL3-203ENST00000560349 TNNI1P19237 187 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 SSTR3P32745 418 aaPredicted RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 ARL2P36404 184 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 BRDTQ58F21 947 aaPredicted RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 RNF10Q8N5U6 811 aaKnown RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 THAP2Q9H0W7 228 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 TRPC6Q9Y210 931 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 IQCA1LA6NCM1 817 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 TNFAIP3P21580 790 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 ADORA2AP29274 412 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 IRX5P78411 483 aaPredicted RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 TARBP2Q15633 366 aaKnown RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 CELF3Q5SZQ8 465 aaKnown RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 ARMCX2Q7L311 632 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 RPUSD2Q8IZ73 545 aaKnown RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 SLC30A5Q8TAD4 765 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 BRI3BPQ8WY22 251 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
CARMIL3-203ENST00000560349 TNFSF9P41273 254 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 CLCN3P51790 818 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 FAM160B1Q5W0V3 765 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 NOP9Q86U38 636 aaKnown RBP15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 TMEM130Q8N3G9 435 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 METTL13Q8N6R0 699 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 SYT11Q9BT88 431 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 NRBP2Q9NSY0 501 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 RBM12Q9NTZ6 932 aaKnown RBP15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 NENFQ9UMX5 172 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 ZBTB42B2RXF5 422 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 KCNK3O14649 394 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 N4BP1O75113 896 aaKnown RBP15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 MYBL2P10244 700 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 CKAP4Q07065 602 aaKnown RBP15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 BIRC3Q13489 604 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 RNF149Q8NC42 400 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 FBXL13Q8NEE6 735 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 SPATA4Q8NEY3 305 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 HVCN1Q96D96 273 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 MS4A4AQ96JQ5 239 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 MFSD14AQ96MC6 490 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 FBXL18Q96ME1 805 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 LRRC1Q9BTT6 524 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 MSTO1Q9BUK6 570 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 NIFKQ9BYG3 293 aaKnown RBP15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 TMEM8AQ9HCN3 771 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 L1RE1Q9UN81 338 aa15.21■□□□□ 0.03
CARMIL3-203ENST00000560349 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.02
CARMIL3-203ENST00000560349 ZNF233A6NK53 670 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 MMEP08473 750 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 ZNF286BP0CG31 522 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 TGFB3P10600 412 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 NAMPTP43490 491 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 RTP1P59025 263 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 OSTNP61366 133 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 MEI1Q5TIA1 1274 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 CRELD2Q6UXH1 353 aaPredicted RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 DAAM2Q86T65 1068 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 TXLNBQ8N3L3 684 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms