RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 BARX2Q9UMQ3 279 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 GIT1Q9Y2X7 761 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 TRIP11Q15643 1979 aa12.83□□□□□ -0.35
RABGGTA-216ENST00000560243 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 K7ERI5 159 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 NRP1O14786 923 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 N4BP3O15049 544 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 NDUFV1P49821 464 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 DSC1Q08554 894 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 DMP1Q13316 513 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 MCM6Q14566 821 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 PDE12Q6L8Q7 609 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 GPBP1Q86WP2 473 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 COLGALT2Q8IYK4 626 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 VPS52Q8N1B4 723 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 KCTD17Q8N5Z5 321 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 PPP2R3CQ969Q6 453 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 CALML4Q96GE6 196 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 MSLNLQ96KJ4 702 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 FAM193BQ96PV7 902 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 CD320Q9NPF0 282 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 UBN1Q9NPG3 1134 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 KMT5AQ9NQR1 393 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 SNTG2Q9NY99 539 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 KANSL3Q9P2N6 904 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 CACNG4Q9UBN1 327 aa12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 PRG3Q9Y2Y8 225 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-216ENST00000560243 TNFRSF10AO00220 468 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 SLC26A4O43511 780 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 RECQL4O94761 1208 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 CXCL14O95715 111 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 ALDH2P05091 517 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 PLS3P13797 630 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 PKP1Q13835 747 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 KCNC3Q14003 757 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 ATF7IP2Q5U623 682 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 DDX53Q86TM3 631 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 HACE1Q8IYU2 909 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 RAD54LQ92698 747 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 TMEM175Q9BSA9 504 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 TARS2Q9BW92 718 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 CCSER1Q9C0I3 900 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 ZBP1Q9H171 429 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 ZSCAN16Q9H4T2 348 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 NGRNQ9NPE2 291 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 TFIP11Q9UBB9 837 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 FAN1Q9Y2M0 1017 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 GDAQ9Y2T3 454 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 SRPRBQ9Y5M8 271 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 PHLPP2Q6ZVD8 1323 aa12.82□□□□□ -0.36
RABGGTA-216ENST00000560243 PTGESO14684 152 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 HSP90AA1P07900 732 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 CA8P35219 290 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 OR1G1P47890 313 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 SMC1AQ14683 1233 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 SLC39A14Q15043 492 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 FOXD4L6Q3SYB3 417 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 LLGL2Q6P1M3 1020 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 FOXD4L3Q6VB84 417 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 TAS1R1Q7RTX1 841 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 FAM178BQ8IXR5 827 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 CEP120Q8N960 986 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 TMEM161BQ8NDZ6 487 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 RASSF8Q8NHQ8 419 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 SPIRE2Q8WWL2 714 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 ACO2Q99798 780 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 PAAF1Q9BRP4 392 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 NTPCRQ9BSD7 190 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 TIPINQ9BVW5 301 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 CDT1Q9H211 546 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 TMEM134Q9H6X4 195 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 C17orf75Q9HAS0 396 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 PTPRHQ9HD43 1115 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 CD207Q9UJ71 328 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 TNFSF13BQ9Y275 285 aa12.81□□□□□ -0.36
RABGGTA-216ENST00000560243 A0A087X0B3 334 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 ABLIM1O14639 778 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 MBTPS2O43462 519 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 CLASP2O75122 1294 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 EFEMP2O95967 443 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 CTSAP10619 480 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 MAPTP10636 758 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 NASPP49321 788 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 PTPN14Q15678 1187 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 DCAF4L1Q3SXM0 396 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 ZBTB33Q86T24 672 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 KHSRPQ92945 711 aaKnown RBP eCLIP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 ZBTB45Q96K62 511 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 ADPGKQ9BRR6 497 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 MRPL4Q9BYD3 311 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 PANK2Q9BZ23 570 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 KCND2Q9NZV8 630 aa12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-216ENST00000560243 TRIOO75962 3097 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms