RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TISP43B9A030 160 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 ANKRD63C9JTQ0 380 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 KRIT1O00522 736 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 SART1O43290 800 aaKnown RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 SHOX2O60902 331 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 RGS20O76081 388 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 ADSSP30520 456 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 GBP1P32455 592 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 CARSP49589 748 aaKnown RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 ACTR2P61160 394 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 CLDN10P78369 228 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 GCNT1Q02742 428 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 MTMR3Q13615 1198 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 DHX34Q14147 1143 aaKnown RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 STXBP2Q15833 593 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 CFAP58Q5T655 872 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 PPP1R2P3Q6NXS1 205 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 ZNF677Q86XU0 584 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 CCDC60Q8IWA6 550 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 RPUSD2Q8IZ73 545 aaKnown RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 IQCKQ8N0W5 287 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 UBL4BQ8N7F7 174 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 TSEN2Q8NCE0 465 aaKnown RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.72□□□□□ -1.016e-6■□□□□ 9
SMAD3-212ENST00000559937 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 BSNDQ8WZ55 320 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 ZKSCAN4Q969J2 545 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-212ENST00000559937 ARHGEF26Q96DR7 871 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 KREMEN1Q96MU8 473 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 RUNDC3BQ96NL0 473 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 RAB17Q9H0T7 212 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 THAP2Q9H0W7 228 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 WNT8AQ9H1J5 351 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 XPNPEP1Q9NQW7 623 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 RAB20Q9NX57 234 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 UVRAGQ9P2Y5 699 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 GTF3C4Q9UKN8 822 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 AFG3L2Q9Y4W6 797 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 STYXL1Q9Y6J8 313 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 ANK1P16157 1881 aa8.71□□□□□ -1.01
SMAD3-212ENST00000559937 IGKV6D-21A0A0A0MT36 114 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GOLGA6L10A0A0M3HER8 536 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 TMEM150BA6NC51 233 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GOLGA8IPA6NC78 632 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GOLGA6CA6NDK9 693 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 ZNF233A6NK53 670 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GOLGA8JA6NMD2 632 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 EXTL3O43909 919 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 LRRN2O75325 713 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 LDHAP00338 332 aaKnown RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 FTLP02792 175 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 CYP1A2P05177 515 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GOLGA6DP0CG33 693 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 CAPN2P17655 700 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 CHRNB2P17787 502 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 ABCB4P21439 1286 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 CTNNA2P26232 953 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 COPB2P35606 906 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 RFC5P40937 340 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 NAMPTP43490 491 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 PDE6CP51160 858 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 DNA2P51530 1060 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GYS2P54840 703 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 BPIFB4P59827 614 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 PTENP60484 403 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SKOR1P84550 965 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 CDR2Q01850 454 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 MAP2K1Q02750 393 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 PSMD6Q15008 389 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 EMC10Q5UCC4 262 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SLFN12LQ6IEE8 588 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SWSAP1Q6NVH7 229 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SLC39A4Q6P5W5 647 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 LBX2Q6XYB7 198 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 C15orf39Q6ZRI6 1047 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 CBWD2Q8IUF1 395 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 RIOX2Q8IUF8 465 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 KLHL7Q8IXQ5 586 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GPC2Q8N158 579 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 PPM1KQ8N3J5 372 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 ZNF526Q8TF50 670 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SLC20A1Q8WUM9 679 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 POMGNT1Q8WZA1 660 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 TRIM11Q96F44 468 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 ZIM3Q96PE6 472 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 NIFKQ9BYG3 293 aaKnown RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 FAM129AQ9BZQ8 928 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 POLR3FQ9H1D9 316 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 DHX33Q9H6R0 707 aaKnown RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 OSGEPQ9NPF4 335 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SEPT11Q9NVA2 429 aaKnown RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GOLGA6AQ9NYA3 693 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 GGA3Q9NZ52 723 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 CTTNBP2NLQ9P2B4 639 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SEPT9Q9UHD8 586 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 NFU1Q9UMS0 254 aa8.71□□□□□ -1.02
SMAD3-212ENST00000559937 SCAF8Q9UPN6 1271 aaKnown RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 MAFBQ9Y5Q3 323 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-212ENST00000559937 ERICH4A6NGS2 130 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms