RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 SCNN1GP51170 649 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 CALCRLQ16602 461 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 SLC27A1Q6PCB7 646 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 ASCL5Q7RTU5 278 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 PALB2Q86YC2 1186 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 RNF168Q8IYW5 571 aaPredicted RBP10.18□□□□□ -0.78
HDDC3-204ENST00000559834 SLC44A3Q8N4M1 653 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 DTWD2Q8NBA8 298 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 ZFP42Q96MM3 310 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 APOL6Q9BWW8 343 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 NT5C3AQ9H0P0 336 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 TTC12Q9H892 705 aaPredicted RBP10.18□□□□□ -0.78
HDDC3-204ENST00000559834 XPNPEP1Q9NQW7 623 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 GJB4Q9NTQ9 266 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 MIOSQ9NXC5 875 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 ZDHHC7Q9NXF8 308 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 FNIP2Q9P278 1114 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 EPS15L1Q9UBC2 864 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
HDDC3-204ENST00000559834 PARP2Q9UGN5 583 aa10.18□□□□□ -0.78
HDDC3-204ENST00000559834 CLUHO75153 1309 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 PRR23AA6NEV1 266 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 PI15O43692 258 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 RFPL2O75678 378 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 CFHP08603 1231 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 GLRA2P23416 452 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 AKAP5P24588 427 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 TXKP42681 527 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 RARRES1P49788 294 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 MBTD1Q05BQ5 628 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 GRIK3Q13003 919 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 CAPSQ13938 189 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 TRIM29Q14134 588 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 CWF19L1Q69YN2 538 aaKnown RBP10.17□□□□□ -0.78
HDDC3-204ENST00000559834 FUT10Q6P4F1 479 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 SPATA31D4Q6ZUB0 917 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 FRMD5Q7Z6J6 570 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 CCDC105Q8IYK2 499 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 FEZF2Q8TBJ5 459 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 ASAP3Q8TDY4 903 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 RIN2Q8WYP3 895 aaPredicted RBP10.17□□□□□ -0.78
HDDC3-204ENST00000559834 GPR62Q9BZJ7 368 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 PRKD2Q9BZL6 878 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 SEMA4AQ9H3S1 761 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 PRMT7Q9NVM4 692 aaPredicted RBP10.17□□□□□ -0.78
HDDC3-204ENST00000559834 ADAM28Q9UKQ2 775 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 TPCN1Q9ULQ1 816 aa10.17□□□□□ -0.78
HDDC3-204ENST00000559834 ZFP37Q9Y6Q3 630 aaPredicted RBP10.17□□□□□ -0.78
HDDC3-204ENST00000559834 ZMYM2Q9UBW7 1377 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 TGM5O43548 720 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 NEMFO60524 1076 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 N4BP1O75113 896 aaKnown RBP10.16□□□□□ -0.78
HDDC3-204ENST00000559834 PAPLNO95428 1278 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 CTDNEP1O95476 244 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 NPTXRO95502 500 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 MYBP10242 640 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 SRFP11831 508 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 LAMP2P13473 410 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 ANAPC15P60006 121 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 NR5A1Q13285 461 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 TUSC3Q13454 348 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 ANGPT1Q15389 498 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 AMHR2Q16671 573 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 EARS2Q5JPH6 523 aaKnown RBP10.16□□□□□ -0.78
HDDC3-204ENST00000559834 LILRA6Q6PI73 481 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 ZBTB8OSQ8IWT0 167 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 GSTCDQ8NEC7 633 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 MCPH1Q8NEM0 835 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 PIGOQ8TEQ8 1089 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 RSAD2Q8WXG1 361 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 PRIMPOLQ96LW4 560 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 POLR3FQ9H1D9 316 aaPredicted RBP10.16□□□□□ -0.78
HDDC3-204ENST00000559834 NXF3Q9H4D5 531 aaKnown RBP10.16□□□□□ -0.78
HDDC3-204ENST00000559834 KLK14Q9P0G3 267 aa10.16□□□□□ -0.78
HDDC3-204ENST00000559834 SF3B1O75533 1304 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDDC3-204ENST00000559834 LRRIQ4A6NIV6 560 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 BTBD18B2RXH4 712 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 N4BP3O15049 544 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 B4GALT5O43286 388 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 NARSO43776 548 aaKnown RBP10.15□□□□□ -0.78
HDDC3-204ENST00000559834 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
HDDC3-204ENST00000559834 ZMYND10O75800 440 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 THP07101 528 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 ATP2B1P20020 1258 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 ELAVL2Q12926 359 aaKnown RBP10.15□□□□□ -0.78
HDDC3-204ENST00000559834 HSP90AA2PQ14568 343 aaPredicted RBP10.15□□□□□ -0.78
HDDC3-204ENST00000559834 TMEM132AQ24JP5 1023 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 PHLDB3Q6NSJ2 640 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 PDXDC1Q6P996 788 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 PPP4R3CPQ6ZMV5 832 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 CEP57Q86XR8 500 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 GLYCTKQ8IVS8 523 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 ADSSL1Q8N142 457 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 KCNG4Q8TDN1 519 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 TNFRSF25Q93038 417 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 ZNF707Q96C28 371 aaPredicted RBP10.15□□□□□ -0.78
HDDC3-204ENST00000559834 SHDQ96IW2 340 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 MTMR9Q96QG7 549 aa10.15□□□□□ -0.78
HDDC3-204ENST00000559834 NACC1Q96RE7 527 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms