RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 DOCK8Q8NF50 2099 aa12.06□□□□□ -0.48
TRAF3-207ENST00000559734 ABCB7O75027 752 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 PSMD10O75832 226 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 HOXA11P31270 313 aaPredicted RBP12.05□□□□□ -0.48
TRAF3-207ENST00000559734 NPEPPSP55786 919 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 PFKPQ01813 784 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 CREMQ03060 361 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 SPEM2Q0P670 501 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 NECTIN1Q15223 517 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 USP41Q3LFD5 358 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 ZBTB44Q8NCP5 570 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 CNNM3Q8NE01 707 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 HASPINQ8TF76 798 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 PRPF31Q8WWY3 499 aaKnown RBP12.05□□□□□ -0.48
TRAF3-207ENST00000559734 PSPC1Q8WXF1 523 aaKnown RBP12.05□□□□□ -0.48
TRAF3-207ENST00000559734 SLC7A3Q8WY07 619 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 ING5Q8WYH8 240 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 FGF13Q92913 245 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 BORCS6Q96GS4 357 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 CPB2Q96IY4 423 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 DDX23Q9BUQ8 820 aaKnown RBP12.05□□□□□ -0.48
TRAF3-207ENST00000559734 CHST7Q9NS84 486 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 MIOSQ9NXC5 875 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 CACNG4Q9UBN1 327 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.05□□□□□ -0.48
TRAF3-207ENST00000559734 CACNA1IQ9P0X4 2223 aa12.05□□□□□ -0.48
TRAF3-207ENST00000559734 EPG5Q9HCE0 2579 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 MYH15Q9Y2K3 1946 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-207ENST00000559734 NCAM2O15394 837 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 TBC1D4O60343 1298 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 LILRB5O75023 590 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 TADA2AO75478 443 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 TDP2O95551 362 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 C8AP07357 584 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 MAGEA9P43362 315 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 PSMC5P62195 406 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 DSC1Q08554 894 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 LILRA6Q6PI73 481 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 PRR23BQ6ZRT6 265 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 ANO5Q75V66 913 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
TRAF3-207ENST00000559734 CEP57Q86XR8 500 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 RNF149Q8NC42 400 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 CCDC148Q8NFR7 591 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 ITFG1Q8TB96 612 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 CEP170P1Q96L14 293 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 ESYT1Q9BSJ8 1104 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 OSBPL6Q9BZF3 934 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 TRIM6Q9C030 488 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-207ENST00000559734 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 FNIP2Q9P278 1114 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 FBXW11Q9UKB1 542 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
TRAF3-207ENST00000559734 ADAM28Q9UKQ2 775 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
TRAF3-207ENST00000559734 TPRP12270 2363 aaKnown RBP12.04□□□□□ -0.48
TRAF3-207ENST00000559734 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 CCDC196A0A1B0GTZ2 297 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 EDIL3O43854 480 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 EFEMP2O95967 443 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 TGM1P22735 817 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 AKAP5P24588 427 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 USP11P51784 963 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 EXOSC10Q01780 885 aaKnown RBP12.03□□□□□ -0.48
TRAF3-207ENST00000559734 LAMTOR4Q0VGL1 99 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 RTP2Q5QGT7 225 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 NOTUMQ6P988 496 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 RSPO2Q6UXX9 243 aaPredicted RBP12.03□□□□□ -0.48
TRAF3-207ENST00000559734 HACE1Q8IYU2 909 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
TRAF3-207ENST00000559734 NETO1Q8TDF5 533 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 TBCKQ8TEA7 893 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 MBOAT7Q96N66 472 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
TRAF3-207ENST00000559734 NXF3Q9H4D5 531 aaKnown RBP12.03□□□□□ -0.48
TRAF3-207ENST00000559734 HEBP1Q9NRV9 189 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 KLK14Q9P0G3 267 aa12.03□□□□□ -0.48
TRAF3-207ENST00000559734 NDRG2Q9UN36 371 aaKnown RBP12.03□□□□□ -0.48
TRAF3-207ENST00000559734 KMT2BQ9UMN6 2715 aaPredicted RBP12.02□□□□□ -0.48
TRAF3-207ENST00000559734 INO80B-WBP1J3KQ70 363 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 TSPAN1O60635 241 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 XYLBO75191 536 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 PAPLNO95428 1278 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 HNRNPA1P09651 372 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAF3-207ENST00000559734 NLRP5P59047 1200 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 NCBP1Q09161 790 aaKnown RBP12.02□□□□□ -0.49
TRAF3-207ENST00000559734 MTAPQ13126 283 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 ADCK5Q3MIX3 580 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 ZNF852Q6ZMS4 543 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 SLC7A14Q8TBB6 771 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 SLC26A6Q9BXS9 759 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 PRMT8Q9NR22 394 aaPredicted RBP12.02□□□□□ -0.49
TRAF3-207ENST00000559734 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 PARP2Q9UGN5 583 aa12.02□□□□□ -0.49
TRAF3-207ENST00000559734 MRPS17Q9Y2R5 130 aaKnown RBP12.02□□□□□ -0.49
TRAF3-207ENST00000559734 SF3B1O75533 1304 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAF3-207ENST00000559734 SPTBN2O15020 2390 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms