RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 RAB27AP51159 221 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 PFKPQ01813 784 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 SF3A2Q15428 464 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 CSRP2Q16527 193 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 HEATR6Q6AI08 1181 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 ZNF746Q6NUN9 644 aaPredicted RBP10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 PRSS55Q6UWB4 352 aaPredicted RBP10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 MTSS1LQ765P7 747 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 MICU3Q86XE3 530 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 MB21D2Q8IYB1 491 aaPredicted RBP10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 CELF5Q8N6W0 485 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 CLDN23Q96B33 292 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 MAP3K14Q99558 947 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 APOL6Q9BWW8 343 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 LRRC2Q9BYS8 371 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 PLA2G2FQ9BZM2 168 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 HCFC1R1Q9NWW0 138 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 STK39Q9UEW8 545 aa10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-208ENST00000559686 CHURC1-FNTBB4DL54 471 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 ADAMTS3O15072 1205 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 ZNF623O75123 536 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 FNTBP49356 437 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 NRLP54845 237 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 SATB1Q01826 763 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 DSG1Q02413 1049 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 ADCY1Q08828 1119 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 PRR16Q569H4 304 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 ARSIQ5FYB1 569 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 RSPO2Q6UXX9 243 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 ZNF852Q6ZMS4 543 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 NIPA1Q7RTP0 329 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 SMAP1Q8IYB5 467 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 COL26A1Q96A83 441 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 MCRS1Q96EZ8 462 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 FAM126AQ9BYI3 521 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 TBC1D22BQ9NU19 505 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 KANSL3Q9P2N6 904 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 SUCLA2Q9P2R7 463 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 CACNG4Q9UBN1 327 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 ZFP37Q9Y6Q3 630 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 NBEAQ8NFP9 2946 aa10.06□□□□□ -0.8
SNRPA1-208ENST00000559686 LAMA1P25391 3075 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 WDR64B1ANS9 1081 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 HRO43593 1189 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 TDGF1P13385 188 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 SPINK2P20155 84 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 MLH1P40692 756 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 RPS9P46781 194 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 DNM2P50570 870 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 SCNN1GP51170 649 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 FZD5Q13467 585 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 GRM2Q14416 872 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 PPM1LQ5SGD2 360 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 LIN9Q5TKA1 542 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 LILRA6Q6PI73 481 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 UNQ6494/PRO21346Q6UXR6 183 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 TMTC3Q6ZXV5 915 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 COLGALT2Q8IYK4 626 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 C12orf50Q8NA57 414 aaPredicted RBP10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 HASPINQ8TF76 798 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 HDAC7Q8WUI4 952 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 DDX1Q92499 740 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 GJA10Q969M2 543 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 GAD1Q99259 594 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 NELL2Q99435 816 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 GPR62Q9BZJ7 368 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 INO80BQ9C086 356 aaPredicted RBP10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 LMAN1LQ9HAT1 526 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 DISC1Q9NRI5 854 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 RXFP3Q9NSD7 469 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 AGPAT5Q9NUQ2 364 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 MIOSQ9NXC5 875 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 MRPS17Q9Y2R5 130 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 HES2Q9Y543 173 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 SLC12A7Q9Y666 1083 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 TICRRQ7Z2Z1 1910 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 CNTNAP5Q8WYK1 1306 aa10.05□□□□□ -0.8
SNRPA1-208ENST00000559686 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 SH2B2O14492 632 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 AXIN1O15169 862 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 LRP3O75074 770 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 PPP1R37O75864 691 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 ZIC2O95409 532 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 C8AP07357 584 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 ITGA4P13612 1032 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 HOXC13P31276 330 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 SHC2P98077 582 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 AP3B2Q13367 1082 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 UBXN11Q5T124 520 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 FUT10Q6P4F1 479 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 CEP68Q76N32 757 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 MRPL10Q7Z7H8 261 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 CHD1LQ86WJ1 897 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 CEP57Q86XR8 500 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 NPAS3Q8IXF0 933 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms