RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 GRIK3Q13003 919 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
LRRC28-213ENST00000559399 ZNF174Q15697 407 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 IER5LQ5T953 404 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 HAUS3Q68CZ6 603 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 ELMSAN1Q6PJG2 1045 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 CCDC149Q6ZUS6 474 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 CDR2LQ86X02 465 aaPredicted RBP16.54■□□□□ 0.24
LRRC28-213ENST00000559399 PLCD3Q8N3E9 789 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 PRSS33Q8NF86 280 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 C2orf40Q9H1Z8 148 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 MIOSQ9NXC5 875 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 WDR81Q562E7 1941 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 ARHGEF35A5YM69 484 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 TEX28O15482 410 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 BRD1O95696 1058 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 RPA1P27694 616 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 PTPN5P54829 565 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 DSG1Q02413 1049 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 TTC38Q5R3I4 469 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 PADI6Q6TGC4 694 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 C15orf39Q6ZRI6 1047 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 TAS1R1Q7RTX1 841 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 NOSTRINQ8IVI9 506 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 FAM184AQ8NB25 1140 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 GSTCDQ8NEC7 633 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 ZSCAN31Q96LW9 406 aaPredicted RBP16.53■□□□□ 0.24
LRRC28-213ENST00000559399 COLEC11Q9BWP8 271 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 MAN1C1Q9NR34 630 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 PARP2Q9UGN5 583 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 DPP7Q9UHL4 492 aa16.53■□□□□ 0.24
LRRC28-213ENST00000559399 F8W810 466 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 GLUD1P00367 558 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 ASGR2P07307 311 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 CYP11B2P19099 503 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 MRE11P49959 708 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.24
LRRC28-213ENST00000559399 FAM187BQ17R55 369 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 TMEM132AQ24JP5 1023 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 KIAA0319Q5VV43 1072 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 OTOP3Q7RTS5 596 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 CMASQ8NFW8 434 aaPredicted RBP16.52■□□□□ 0.24
LRRC28-213ENST00000559399 DEPTORQ8TB45 409 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 FEZF2Q8TBJ5 459 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 ACSF2Q96CM8 615 aaPredicted RBP16.52■□□□□ 0.24
LRRC28-213ENST00000559399 FZD8Q9H461 694 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 RXFP1Q9HBX9 757 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 SH2B1Q9NRF2 756 aaPredicted RBP16.52■□□□□ 0.24
LRRC28-213ENST00000559399 KLK14Q9P0G3 267 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 LIMD1Q9UGP4 676 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 NOL7Q9UMY1 257 aaKnown RBP16.52■□□□□ 0.24
LRRC28-213ENST00000559399 TECTAO75443 2155 aa16.52■□□□□ 0.24
LRRC28-213ENST00000559399 TRIOO75962 3097 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 N4BP3O15049 544 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 MUTP22033 750 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 NAMPTP43490 491 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
LRRC28-213ENST00000559399 MAPK6Q16659 721 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 FUT10Q6P4F1 479 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 BSNDQ8WZ55 320 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 PDZD7Q9H5P4 517 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRRC28-213ENST00000559399 CHST7Q9NS84 486 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 ADAM28Q9UKQ2 775 aa16.51■□□□□ 0.23
LRRC28-213ENST00000559399 PDGFBP01127 241 aaPredicted RBP16.5■□□□□ 0.23
LRRC28-213ENST00000559399 PRKCBP05771 671 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 AVPR2P30518 371 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 CCT6AP40227 531 aaKnown RBP16.5■□□□□ 0.23
LRRC28-213ENST00000559399 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
LRRC28-213ENST00000559399 CREMQ03060 361 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 PPP2R5AQ15172 486 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 CYP26C1Q6V0L0 522 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 GPR65Q8IYL9 337 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 ADPGKQ9BRR6 497 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 GPR62Q9BZJ7 368 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 SMOC2Q9H3U7 446 aa16.5■□□□□ 0.23
LRRC28-213ENST00000559399 SF3B1O75533 1304 aaKnown RBP eCLIP16.49■□□□□ 0.23
LRRC28-213ENST00000559399 TTLL13PA6NNM8 815 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 ACKR2O00590 384 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 TADA2AO75478 443 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 C1RP00736 705 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 LIG1P18858 919 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 TCF15Q12870 199 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 TUSC3Q13454 348 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
LRRC28-213ENST00000559399 NBR1Q14596 966 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 RABGGTAQ92696 567 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 KIF2CQ99661 725 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 RHOBTB2Q9BYZ6 727 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 BHMT2Q9H2M3 363 aa16.49■□□□□ 0.23
LRRC28-213ENST00000559399 WDFY4Q6ZS81 3184 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 ARID2Q68CP9 1835 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 CCDC195A0A1B0GUA6 201 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 CASTOR2A6NHX0 329 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 RECQL4O94761 1208 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms