RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 EDRF1Q3B7T1 1238 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 CRELD2Q6UXH1 353 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 DUSP9Q99956 384 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 ADAM2Q99965 735 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 EIF2AQ9BY44 585 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 ELAC1Q9H777 363 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 MAPK8IP1Q9UQF2 711 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 ANK1P16157 1881 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 SYCE3A1L190 88 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 KIAA0391O15091 583 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 EFCAB14O75071 495 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 ERCC5P28715 1186 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 MAGEA10P43363 369 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 LIG4P49917 911 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 RAB27AP51159 221 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 LRRC63Q05C16 580 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 DCAF4L1Q3SXM0 396 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 SLFN12LQ6IEE8 588 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 PSRC1Q6PGN9 363 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 SLC24A5Q71RS6 500 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 DEFB128Q7Z7B8 93 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 CDR2LQ86X02 465 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 NELFCDQ8IXH7 590 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 GOLGA5Q8TBA6 731 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 HERVK_113Q902F9 699 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 P2RX5Q93086 422 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.2■□□□□ 0.182e-8■□□□□ 10.7
SNRPA1-207ENST00000559309 CBWD1Q9BRT8 395 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 C1orf112Q9NSG2 853 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 FAM105AQ9NUU6 356 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 RWDD2AQ9UIY3 292 aa16.2■□□□□ 0.18
SNRPA1-207ENST00000559309 PDCD11Q14690 1871 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 PSMA7O14818 248 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 CLDN3O15551 220 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 ACRP10323 421 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 ZNF445P59923 1031 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 NCBP1Q09161 790 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 IKBKEQ14164 716 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 NOLC1Q14978 699 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 STX1AQ16623 288 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 XKR4Q5GH76 650 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 ANKRD40Q6AI12 368 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 SASS6Q6UVJ0 657 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 LRRC55Q6ZSA7 311 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 ZSWIM2Q8NEG5 633 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 BPIFA3Q9BQP9 254 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 RC3H2Q9HBD1 1191 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 RNF19AQ9NV58 838 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 ANO10Q9NW15 660 aa16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 CPSF3Q9UKF6 684 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-207ENST00000559309 MAPK13O15264 365 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 OGTO15294 1046 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 EOMESO95936 686 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 FGBP02675 491 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 GRM5P41594 1212 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 WDR5P61964 334 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 STIM1Q13586 685 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 ZNF568Q3ZCX4 644 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 ALKAL1Q6UXT8 129 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 HS2ST1Q7LGA3 356 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 ECHDC2Q86YB7 292 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 CEP120Q8N960 986 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 GZF1Q9H116 711 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 IPPQ9Y573 584 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 PCDHB2Q9Y5E7 798 aa16.18■□□□□ 0.18
SNRPA1-207ENST00000559309 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 SKIP12755 728 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 PAK1Q13153 545 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 KYAT1Q16773 422 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 TWF2Q6IBS0 349 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.17■□□□□ 0.187e-6■□□□□ 8.4
SNRPA1-207ENST00000559309 AGMOQ6ZNB7 445 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 TMEM192Q8IY95 271 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 SYCP3Q8IZU3 236 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 NELFBQ8WX92 580 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 TOP1MTQ969P6 601 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 BORCS6Q96GS4 357 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 LRCH3Q96II8 777 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 NXF3Q9H4D5 531 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 HSPBP1Q9NZL4 362 aa16.17■□□□□ 0.18
SNRPA1-207ENST00000559309 CITO14578 2027 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 CALUO43852 315 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 EXTL3O43909 919 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 NPTXRO95502 500 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 LDHAP00338 332 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 NR3C1P04150 777 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 ACTN1P12814 892 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 MARSP56192 900 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 ENPEPQ07075 957 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 NCAPHQ15003 741 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 ZBTB41Q5SVQ8 909 aa16.16■□□□□ 0.18
SNRPA1-207ENST00000559309 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms