RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.29
TPM1-216ENST00000558910 APOL5Q9BWW9 433 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 NXF3Q9H4D5 531 aaKnown RBP13.27□□□□□ -0.29
TPM1-216ENST00000558910 RSAD1Q9HA92 442 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 TBC1D13Q9NVG8 400 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 DNAJB4Q9UDY4 337 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 COG5Q9UP83 839 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 IPPQ9Y573 584 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 KIAA1671Q9BY89 1806 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 FNDC1Q4ZHG4 1894 aaPredicted RBP13.27□□□□□ -0.29
TPM1-216ENST00000558910 EYA4O95677 639 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 HARSP12081 509 aaKnown RBP13.26□□□□□ -0.29
TPM1-216ENST00000558910 SKIP12755 728 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 MLH1P40692 756 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 ALDH7A1P49419 539 aaKnown RBP13.26□□□□□ -0.29
TPM1-216ENST00000558910 RAB27AP51159 221 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 SCNN1GP51170 649 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 PEX3P56589 373 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 RESTQ13127 1097 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 KARSQ15046 597 aaKnown RBP13.26□□□□□ -0.29
TPM1-216ENST00000558910 AMHR2Q16671 573 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 ZNF280BQ86YH2 543 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 SMG8Q8ND04 991 aaKnown RBP13.26□□□□□ -0.29
TPM1-216ENST00000558910 P2RX5Q93086 422 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 ZFP42Q96MM3 310 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 UHRF1Q96T88 793 aaPredicted RBP13.26□□□□□ -0.29
TPM1-216ENST00000558910 GAD1Q99259 594 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 TCF25Q9BQ70 676 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 ZHX3Q9H4I2 956 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 NRDE2Q9H7Z3 1164 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 TLR9Q9NR96 1032 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 SPG21Q9NZD8 308 aa13.26□□□□□ -0.29
TPM1-216ENST00000558910 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
TPM1-216ENST00000558910 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
TPM1-216ENST00000558910 BRWD1Q9NSI6 2320 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
TPM1-216ENST00000558910 STX6O43752 255 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 B4GALT3O60512 393 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 DDHD2O94830 711 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 EDN1P05305 212 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 PLA2G4BP0C869 781 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 UBA7P41226 1012 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 OR1G1P47890 313 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 SLC11A1P49279 550 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 NDUFV1P49821 464 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 KRT17Q04695 432 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 DLX2Q07687 328 aaPredicted RBP13.25□□□□□ -0.29
TPM1-216ENST00000558910 PRPF4BQ13523 1007 aaKnown RBP13.25□□□□□ -0.29
TPM1-216ENST00000558910 AAK1Q2M2I8 961 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 TPRNQ4KMQ1 711 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 RINT1Q6NUQ1 792 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 TMEM173Q86WV6 379 aaPredicted RBP13.25□□□□□ -0.29
TPM1-216ENST00000558910 TMEM87AQ8NBN3 555 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 SYMPKQ92797 1274 aaKnown RBP13.25□□□□□ -0.29
TPM1-216ENST00000558910 CALML4Q96GE6 196 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 TMEM169Q96HH4 297 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 MRPL9Q9BYD2 267 aaKnown RBP13.25□□□□□ -0.29
TPM1-216ENST00000558910 PANK2Q9BZ23 570 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 LMAN2LQ9H0V9 348 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 TLE6Q9H808 572 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 MIOSQ9NXC5 875 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 CACNG4Q9UBN1 327 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 PUF60Q9UHX1 559 aaKnown RBP13.25□□□□□ -0.29
TPM1-216ENST00000558910 MTMR6Q9Y217 621 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 GDAQ9Y2T3 454 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 RALGAPA2Q2PPJ7 1873 aa13.25□□□□□ -0.29
TPM1-216ENST00000558910 HIDE1A8MVS5 230 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 SLC16A4O15374 487 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 KRT18P05783 430 aaKnown RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 MYBP10242 640 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 IL9P15248 144 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 AXLP30530 894 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 OSTNP61366 133 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 MCM6Q14566 821 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 MAPK6Q16659 721 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 EEF1DP3Q658K8 133 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 SLC27A1Q6PCB7 646 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 BCL7CQ8WUZ0 217 aaPredicted RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 MRPS27Q92552 414 aaKnown RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 C2orf40Q9H1Z8 148 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 PRMT7Q9NVM4 692 aaPredicted RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 SNTG2Q9NY99 539 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 BARX2Q9UMQ3 279 aaPredicted RBP13.24□□□□□ -0.29
TPM1-216ENST00000558910 TTC28Q96AY4 2481 aa13.24□□□□□ -0.29
TPM1-216ENST00000558910 ARL5CA6NH57 179 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 F8W810 466 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 C2CD2LO14523 706 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 ZNF623O75123 536 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 CXCL14O95715 111 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 BMP1P13497 986 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 PLCG1P19174 1290 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
TPM1-216ENST00000558910 MUTP22033 750 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 NAMPTP43490 491 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms