RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 H0YCG3 227 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 P4HA2O15460 535 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 PJA2O43164 708 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 SLU7O95391 586 aaKnown RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 PNMA6AP0CW24 399 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 KRT13P13646 458 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 CPT1AP50416 773 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 NCBP1Q09161 790 aaKnown RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 FSCN1Q16658 493 aaKnown RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 DGKDQ16760 1214 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 CCDC122Q5T0U0 273 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 PHLDB3Q6NSJ2 640 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 PARD3BQ8TEW8 1205 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 IFIH1Q9BYX4 1025 aaKnown RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 TMEM117Q9H0C3 514 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 A0A087X0T9 212 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 A6NJR5 290 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 LRRIQ3A6PVS8 624 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-207ENST00000558763 F8VZ95 297 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 AKR1B10O60218 316 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 URI1O94763 535 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-207ENST00000558763 FAM228BP0C875 321 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 GCLMP48507 274 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 AMPD2Q01433 879 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 PTK2Q05397 1052 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 ASIC2Q16515 512 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 TDRD12Q587J7 1177 aaKnown RBP14.06□□□□□ -0.16
SMAD3-207ENST00000558763 ZNF571Q7Z3V5 609 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-207ENST00000558763 KIAA1328Q86T90 577 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 SYT11Q9BT88 431 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 CCDC113Q9H0I3 377 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 UNC93B1Q9H1C4 597 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 APEX2Q9UBZ4 518 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 Q9Y3F1 56 aa14.06□□□□□ -0.16
SMAD3-207ENST00000558763 LRRIQ4A6NIV6 560 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SCP2P22307 547 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 ABCD1P33897 745 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SLC26A2P50443 739 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 WNT7BP56706 349 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 GJA9P57773 515 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 CHMP4BP1P59074 171 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 ARID5AQ03989 594 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 CYP24A1Q07973 514 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 MTFR1Q15390 333 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SLC18A3Q16572 532 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 CDCA2Q69YH5 1023 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 FBXO46Q6PJ61 603 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 EHBP1Q8NDI1 1231 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 TRAPPC12Q8WVT3 735 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 PRPF31Q8WWY3 499 aaKnown RBP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 POMGNT1Q8WZA1 660 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SPAG5Q96R06 1193 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SMARCAD1Q9H4L7 1026 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 TMEM134Q9H6X4 195 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SPC25Q9HBM1 224 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 TOPORSQ9NS56 1045 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SALL4Q9UJQ4 1053 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 FRMPD3Q5JV73 1810 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 KRT86O43790 486 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 ADAMTS4O75173 837 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 IPO7O95373 1038 aaKnown RBP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 MYL3P08590 195 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 ENPEPQ07075 957 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 KLHL30Q0D2K2 578 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 SPA17Q15506 151 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 GNASQ5JWF2 1037 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 CRELD2Q6UXH1 353 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-207ENST00000558763 GPD1LQ8N335 351 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 TMC2Q8TDI7 906 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 C16orf70Q9BSU1 422 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 STK33Q9BYT3 514 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 RNPEPQ9H4A4 650 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 DEF6Q9H4E7 631 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 KCNG1Q9UIX4 513 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 DNAJC12Q9UKB3 198 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 COQ4Q9Y3A0 265 aa14.05□□□□□ -0.16
SMAD3-207ENST00000558763 MSCO60682 206 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 N4BP1O75113 896 aaKnown RBP14.04□□□□□ -0.16
SMAD3-207ENST00000558763 MXI1P50539 228 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 CLDN10P78369 228 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 ARHGEF19Q8IW93 802 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 LRRC71Q8N4P6 559 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 DEPTORQ8TB45 409 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 PPP1R13LQ8WUF5 828 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 ANKRD7Q92527 254 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 SEMA4DQ92854 862 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 ZBTB10Q96DT7 871 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 ZBTB45Q96K62 511 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-207ENST00000558763 POP1Q99575 1024 aaKnown RBP14.04□□□□□ -0.16
SMAD3-207ENST00000558763 UPF3AQ9H1J1 476 aaKnown RBP14.04□□□□□ -0.16
SMAD3-207ENST00000558763 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 DAAM1Q9Y4D1 1078 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 CAPN6Q9Y6Q1 641 aa14.04□□□□□ -0.16
SMAD3-207ENST00000558763 H3BRB1 525 aa14.03□□□□□ -0.16
SMAD3-207ENST00000558763 ABLIM1O14639 778 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms