RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PLS3P13797 630 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 CLEC17AQ6ZS10 378 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 TAS1R3Q7RTX0 852 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 CATSPER4Q7RTX7 472 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 SPIRE2Q8WWL2 714 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 IFT74Q96LB3 600 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 FIZ1Q96SL8 496 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 FTHL17Q9BXU8 183 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 LMAN2LQ9H0V9 348 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 CUEDC2Q9H467 287 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 C17orf75Q9HAS0 396 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 CLEC1BQ9P126 229 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
LINC01220-201ENST00000558575 C9IYK1 514 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 INO80B-WBP1J3KQ70 363 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 B4GALT5O43286 388 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 TSPAN1O60635 241 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 SLFN14P0C7P3 912 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC01220-201ENST00000558575 CASP1P29466 404 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 ID4P47928 161 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 CAMK1Q14012 370 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 ODR4Q5SWX8 454 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 SMRP1Q8NCR6 262 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 MRPS27Q92552 414 aaKnown RBP17.09■□□□□ 0.33
LINC01220-201ENST00000558575 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 ARHGAP28Q9P2N2 729 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 CEP250Q9BV73 2442 aa17.09■□□□□ 0.33
LINC01220-201ENST00000558575 CCDC169A6NNP5 214 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 SLC16A4O15374 487 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 KRT18P05783 430 aaKnown RBP17.08■□□□□ 0.32
LINC01220-201ENST00000558575 BMPR1AP36894 532 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 SYKP43405 635 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 NDUFV1P49821 464 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.32
LINC01220-201ENST00000558575 FAM187BQ17R55 369 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 UBXN11Q5T124 520 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
LINC01220-201ENST00000558575 GRAMD1CQ8IYS0 662 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 FIBCD1Q8N539 461 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 ENGASEQ8NFI3 743 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 DEPTORQ8TB45 409 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 PAGE5Q96GU1 130 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 C7orf25Q9BPX7 421 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 KMT5AQ9NQR1 393 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 CHST12Q9NRB3 414 aa17.08■□□□□ 0.32
LINC01220-201ENST00000558575 DNAH14Q0VDD8 3507 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 FRMD3A2A2Y4 597 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 GALR2O43603 387 aaPredicted RBP17.07■□□□□ 0.32
LINC01220-201ENST00000558575 FAM13AO94988 1023 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 ZNF202O95125 648 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 RB1P06400 928 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
LINC01220-201ENST00000558575 NBL1P41271 181 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 AFMP43652 599 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 NCKAP1LP55160 1127 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 DMP1Q13316 513 aaPredicted RBP17.07■□□□□ 0.32
LINC01220-201ENST00000558575 NT5DC1Q5TFE4 455 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 CNNM4Q6P4Q7 775 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 SLC24A5Q71RS6 500 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 ADGRD2Q7Z7M1 963 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 FMR1NBQ8N0W7 255 aaPredicted RBP17.07■□□□□ 0.32
LINC01220-201ENST00000558575 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 KCNN1Q92952 543 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 CPB2Q96IY4 423 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 C11orf84Q9BUA3 381 aaPredicted RBP17.07■□□□□ 0.32
LINC01220-201ENST00000558575 C2orf40Q9H1Z8 148 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 TMEM134Q9H6X4 195 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
LINC01220-201ENST00000558575 PIN4Q9Y237 131 aaKnown RBP17.07■□□□□ 0.32
LINC01220-201ENST00000558575 USP15Q9Y4E8 981 aaPredicted RBP17.07■□□□□ 0.32
LINC01220-201ENST00000558575 CACNA1GO43497 2377 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 ACKR2O00590 384 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 GLP2RO95838 553 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 SARSP49591 514 aaKnown RBP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 EFNA5P52803 228 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 CUL4BQ13620 913 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 PCBP1Q15365 356 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 CDR2LQ86X02 465 aaPredicted RBP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 ZBTB8OSQ8IWT0 167 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 TRAIPQ9BWF2 469 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 ZHX3Q9H4I2 956 aa17.06■□□□□ 0.32
LINC01220-201ENST00000558575 RC3H2Q9HBD1 1191 aaKnown RBP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
LINC01220-201ENST00000558575 LARSQ9P2J5 1176 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms