RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 BCAR1P56945 870 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 AMPD3Q01432 767 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 MAPK7Q13164 816 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 GIT2Q14161 759 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 DHX8Q14562 1220 aaKnown RBP9.32□□□□□ -0.92
TPM1-213ENST00000558400 MCM6Q14566 821 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 LONRF3Q496Y0 759 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 SPECC1Q5M775 1068 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 ATF7IP2Q5U623 682 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
TPM1-213ENST00000558400 MYCT1Q8N699 235 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
TPM1-213ENST00000558400 MRPS27Q92552 414 aaKnown RBP9.32□□□□□ -0.92
TPM1-213ENST00000558400 TMEM169Q96HH4 297 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 TCHPQ9BT92 498 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 EIF2AQ9BY44 585 aaKnown RBP9.32□□□□□ -0.92
TPM1-213ENST00000558400 CUEDC2Q9H467 287 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 NRDE2Q9H7Z3 1164 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 TLR9Q9NR96 1032 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 PARP2Q9UGN5 583 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 RCOR1Q9UKL0 485 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 INPP5FQ9Y2H2 1132 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 FAN1Q9Y2M0 1017 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 PTPRSQ13332 1948 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 BRWD1Q9NSI6 2320 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 REV3LO60673 3130 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 SLC16A4O15374 487 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 TRAK2O60296 914 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 ZC3H11AO75152 810 aaKnown RBP eCLIP9.31□□□□□ -0.92
TPM1-213ENST00000558400 TBCAO75347 108 aaKnown RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 BRD1O95696 1058 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 MAPTP10636 758 aaKnown RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 STAT6P42226 847 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 ME1P48163 572 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 KCNQ1P51787 676 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 ZNF131P52739 623 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 KRT85P78386 507 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 NUCB2P80303 420 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 RAD51AP2Q09MP3 1159 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 CAMK1Q14012 370 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 KYAT1Q16773 422 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 NT5DC1Q5TFE4 455 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 ZPBP2Q6X784 338 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 USP49Q70CQ1 688 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 HAUS6Q7Z4H7 955 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 DDX53Q86TM3 631 aaKnown RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 SLC39A11Q8N1S5 342 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 PLCD3Q8N3E9 789 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 IQUBQ8NA54 791 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 TMEM161BQ8NDZ6 487 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 KIF12Q96FN5 646 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 RPS6KC1Q96S38 1066 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 GAD1Q99259 594 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 CDCA3Q99618 268 aaPredicted RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 ACO2Q99798 780 aaKnown RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 REEP2Q9BRK0 252 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 COLEC11Q9BWP8 271 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 PANK2Q9BZ23 570 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 SCAND2PQ9GZW5 306 aaPredicted RBP9.31□□□□□ -0.92
TPM1-213ENST00000558400 PDZD7Q9H5P4 517 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 FAM13BQ9NYF5 915 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 SEL1LQ9UBV2 794 aa9.31□□□□□ -0.92
TPM1-213ENST00000558400 ZNF318Q5VUA4 2279 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 FAM86C2PA6NEL3 165 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 MEIS3P2A8K0S8 358 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 CLDN3O15551 220 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 TOM1L1O75674 476 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 POMCP01189 267 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 THP07101 528 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 MCF2P10911 925 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 GAP43P17677 238 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 AKAP5P24588 427 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 YARSP54577 528 aaKnown RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 NCKAP1LP55160 1127 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 TFF2Q03403 129 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 DNM1Q05193 864 aaKnown RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 GRIK3Q13003 919 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 TCEAL5Q5H9L2 206 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 TMC7Q7Z402 723 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 CDR2LQ86X02 465 aaPredicted RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 ZNF280BQ86YH2 543 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 FAM178BQ8IXR5 827 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 TMEM87AQ8NBN3 555 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 DDX12PQ92771 950 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 PABPC5Q96DU9 382 aaKnown RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 IGSF21Q96ID5 467 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 KIFC3Q9BVG8 833 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 CCDC94Q9BW85 323 aaPredicted RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 TARS2Q9BW92 718 aaKnown RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 APOL6Q9BWW8 343 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 GBP3Q9H0R5 595 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 NXF3Q9H4D5 531 aaKnown RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 ST6GALNAC4Q9H4F1 302 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 ZHX3Q9H4I2 956 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 TLE6Q9H808 572 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 PTPRHQ9HD43 1115 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 TOPORSQ9NS56 1045 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms