RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ASAP3Q8TDY4 903 aa11.2□□□□□ -0.62
USP3-207ENST00000558218 IGSF21Q96ID5 467 aa11.2□□□□□ -0.62
USP3-207ENST00000558218 FAM193BQ96PV7 902 aaPredicted RBP11.2□□□□□ -0.62
USP3-207ENST00000558218 TCF25Q9BQ70 676 aa11.2□□□□□ -0.62
USP3-207ENST00000558218 POLR3FQ9H1D9 316 aaPredicted RBP11.2□□□□□ -0.62
USP3-207ENST00000558218 FZD8Q9H461 694 aa11.2□□□□□ -0.62
USP3-207ENST00000558218 NRDE2Q9H7Z3 1164 aa11.2□□□□□ -0.62
USP3-207ENST00000558218 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
USP3-207ENST00000558218 PRMT7Q9NVM4 692 aaPredicted RBP11.2□□□□□ -0.62
USP3-207ENST00000558218 GIT1Q9Y2X7 761 aa11.2□□□□□ -0.62
USP3-207ENST00000558218 ARHGEF35A5YM69 484 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 SLC26A4O43511 780 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 TBX10O75333 385 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 ARF4P18085 180 aaPredicted RBP11.19□□□□□ -0.62
USP3-207ENST00000558218 GTF2F1P35269 517 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP3-207ENST00000558218 CCT6AP40227 531 aaKnown RBP11.19□□□□□ -0.62
USP3-207ENST00000558218 NAMPTP43490 491 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 EFNA5P52803 228 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 AMHR2Q16671 573 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 KRT79Q5XKE5 535 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 ARL6IP4Q66PJ3 421 aaKnown RBP11.19□□□□□ -0.62
USP3-207ENST00000558218 CDCA2Q69YH5 1023 aaPredicted RBP11.19□□□□□ -0.62
USP3-207ENST00000558218 RBM23Q86U06 439 aaKnown RBP11.19□□□□□ -0.62
USP3-207ENST00000558218 ZBTB8OSQ8IWT0 167 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 SMG8Q8ND04 991 aaKnown RBP11.19□□□□□ -0.62
USP3-207ENST00000558218 KIFAP3Q92845 792 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 LPPQ93052 612 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 ENTPD7Q9NQZ7 604 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 DNM3Q9UQ16 869 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 SSX2IPQ9Y2D8 614 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 IPPQ9Y573 584 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 PCDHB6Q9Y5E3 794 aa11.19□□□□□ -0.62
USP3-207ENST00000558218 VCANP13611 3396 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 PHLPP2Q6ZVD8 1323 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 C2orf71A6NGG8 1288 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 MEIS3P2A8K0S8 358 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 H3BQV1 296 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 PER2O15055 1255 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 LINC01565O15544 149 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 USO1O60763 962 aaKnown RBP11.18□□□□□ -0.62
USP3-207ENST00000558218 GPR37L1O60883 481 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 ZC3H11AO75152 810 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP3-207ENST00000558218 NR1I2O75469 434 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 CXCL14O95715 111 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 C1RP00736 705 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 CTSAP10619 480 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 GJB2P29033 226 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
USP3-207ENST00000558218 ZP2Q05996 745 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 MAPK6Q16659 721 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
USP3-207ENST00000558218 SLC27A1Q6PCB7 646 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 PPFIBP1Q86W92 1011 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 GPR65Q8IYL9 337 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 CASP10Q92851 521 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 IFT74Q96LB3 600 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 TIPINQ9BVW5 301 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 TRIM6Q9C030 488 aaPredicted RBP11.18□□□□□ -0.62
USP3-207ENST00000558218 C17orf75Q9HAS0 396 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 CD320Q9NPF0 282 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 KIAA1024Q9UPX6 916 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 FAN1Q9Y2M0 1017 aa11.18□□□□□ -0.62
USP3-207ENST00000558218 A0A087WWV3 80 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 ARL5CA6NH57 179 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 LRRIQ4A6NIV6 560 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 ACKR2O00590 384 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 DDHD2O94830 711 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 GLP2RO95838 553 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 BMP15O95972 392 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 ATP2C1P98194 919 aaPredicted RBP11.17□□□□□ -0.62
USP3-207ENST00000558218 ITIH3Q06033 890 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 HYIQ5T013 277 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 PLPP4Q5VZY2 271 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 MCTP1Q6DN14 999 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 ANKRD54Q6NXT1 300 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 APBB1IPQ7Z5R6 666 aaPredicted RBP11.17□□□□□ -0.62
USP3-207ENST00000558218 ZNF280BQ86YH2 543 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 VPS52Q8N1B4 723 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 DEPTORQ8TB45 409 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 SUSD6Q92537 303 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 EIF2AQ9BY44 585 aaKnown RBP11.17□□□□□ -0.62
USP3-207ENST00000558218 NT5C3AQ9H0P0 336 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 ZBP1Q9H171 429 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 S1PR5Q9H228 398 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 BHMT2Q9H2M3 363 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 EPHX3Q9H6B9 360 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 INPP5FQ9Y2H2 1132 aa11.17□□□□□ -0.62
USP3-207ENST00000558218 HIDE1A8MVS5 230 aa11.16□□□□□ -0.62
USP3-207ENST00000558218 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
USP3-207ENST00000558218 N4BP3O15049 544 aa11.16□□□□□ -0.62
USP3-207ENST00000558218 PDCP20941 246 aa11.16□□□□□ -0.62
USP3-207ENST00000558218 PBX3P40426 434 aa11.16□□□□□ -0.62
USP3-207ENST00000558218 SLC11A1P49279 550 aa11.16□□□□□ -0.62
USP3-207ENST00000558218 DSC1Q08554 894 aa11.16□□□□□ -0.62
USP3-207ENST00000558218 PRPF4BQ13523 1007 aaKnown RBP11.16□□□□□ -0.62
USP3-207ENST00000558218 CUL4AQ13619 759 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms