RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 LDHAP00338 332 aaKnown RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 ITGA4P13612 1032 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 HOXD13P35453 343 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 KCNA1Q09470 495 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 NOLC1Q14978 699 aaKnown RBP eCLIP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 EEF1DP3Q658K8 133 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 CDR2LQ86X02 465 aaPredicted RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 NELFCDQ8IXH7 590 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 CRIPAKQ8N1N5 446 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 POMGNT1Q8WZA1 660 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 ZBTB45Q96K62 511 aaPredicted RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 EIF2AQ9BY44 585 aaKnown RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 CDT1Q9H211 546 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 CXXC1Q9P0U4 656 aaPredicted RBP11.45□□□□□ -0.58
LRRC28-204ENST00000558172 ANKFY1Q9P2R3 1169 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 IPPQ9Y573 584 aa11.45□□□□□ -0.58
LRRC28-204ENST00000558172 ANK1P16157 1881 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 ZMYM2Q9UBW7 1377 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 A0A0B4J269 797 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 BIN1O00499 593 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 ABLIM1O14639 778 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 OGTO15294 1046 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 CALUO43852 315 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 ATP2A2P16615 1042 aaKnown RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 GRM5P41594 1212 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 PRCPP42785 496 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 DEFB103AP81534 67 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 POU5F1Q01860 360 aaKnown RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 MYBPC2Q14324 1141 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 ISM2Q6H9L7 571 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 CAVIN1Q6NZI2 390 aaKnown RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 ARMCX5Q6P1M9 558 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 SLC39A4Q6P5W5 647 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 SASS6Q6UVJ0 657 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 ZBTB33Q86T24 672 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 C12orf56Q8IXR9 622 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 SMG8Q8ND04 991 aaKnown RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 TMEM174Q8WUU8 243 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 DHTKD1Q96HY7 919 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 MSTO1Q9BUK6 570 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 KCTD10Q9H3F6 313 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 TMEM63CQ9P1W3 806 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 DACH1Q9UI36 760 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 AGO2Q9UKV8 859 aaKnown RBP11.44□□□□□ -0.58
LRRC28-204ENST00000558172 TRAF3IP3Q9Y228 551 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 GIT1Q9Y2X7 761 aa11.44□□□□□ -0.58
LRRC28-204ENST00000558172 TRIOBPQ9H2D6 2365 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 PSMA7O14818 248 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 TGFB1I1O43294 461 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 DGKIO75912 1065 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 UPP2O95045 317 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 GJB5O95377 273 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 ADSSP30520 456 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 YARSP54577 528 aaKnown RBP11.43□□□□□ -0.58
LRRC28-204ENST00000558172 NLRP12P59046 1061 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 NFIL3Q16649 462 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 CT47A1Q5JQC4 288 aaPredicted RBP11.43□□□□□ -0.58
LRRC28-204ENST00000558172 CENPPQ6IPU0 288 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 FOXR2Q6PJQ5 311 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 HERC6Q8IVU3 1022 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 SMYD4Q8IYR2 804 aaPredicted RBP11.43□□□□□ -0.58
LRRC28-204ENST00000558172 ABI1Q8IZP0 508 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 MLKLQ8NB16 471 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 RNF169Q8NCN4 708 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 ACAP3Q96P50 834 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 TSG101Q99816 390 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 RSAD1Q9HA92 442 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 KIAA1586Q9HCI6 787 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 AGPAT3Q9NRZ7 376 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 MAPK8IP1Q9UQF2 711 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 INSL6Q9Y581 213 aa11.43□□□□□ -0.58
LRRC28-204ENST00000558172 NLRC5Q86WI3 1866 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 CLTAP09496 248 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 HARSP12081 509 aaKnown RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 ATF7P17544 494 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 IBSPP21815 317 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 BMP6P22004 513 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 CCNE1P24864 410 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 RPL13P26373 211 aaKnown RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 HTRA4P83105 476 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 LRRC63Q05C16 580 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 GLB1LQ6UWU2 654 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 AGMOQ6ZNB7 445 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 SLC9A9Q8IVB4 645 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 CD302Q8IX05 232 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 THNSL1Q8IYQ7 743 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 GPD1LQ8N335 351 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 XXYLT1Q8NBI6 393 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 ZNF689Q96CS4 500 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 RAD9AQ99638 391 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms