RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNX1-203ENST00000558040 SQORQ9Y6N5 450 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 A0A1B0GTH6 734 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 A0A1B0GUA9 196 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 ZNF233A6NK53 670 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 PES1O00541 588 aaKnown RBP18.38■□□□□ 0.53
SNX1-203ENST00000558040 OGTO15294 1046 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 PQBP1O60828 265 aaKnown RBP18.38■□□□□ 0.53
SNX1-203ENST00000558040 RPS6KA5O75582 802 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 MCF2P10911 925 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 HARSP12081 509 aaKnown RBP18.38■□□□□ 0.53
SNX1-203ENST00000558040 CKBP12277 381 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 FGFR4P22455 802 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 KYAT1Q16773 422 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 DCAF4L1Q3SXM0 396 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 APTXQ7Z2E3 356 aaKnown RBP18.38■□□□□ 0.53
SNX1-203ENST00000558040 NECAB2Q7Z6G3 386 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 ZBTB33Q86T24 672 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 TRIM59Q8IWR1 403 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 USP38Q8NB14 1042 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 DIS3LQ8TF46 1054 aaKnown RBP18.38■□□□□ 0.53
SNX1-203ENST00000558040 CCDC51Q96ER9 411 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 MRFAP1L1Q96HT8 127 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 CPB2Q96IY4 423 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 TOX2Q96NM4 488 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 FAM213AQ9BRX8 229 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 VPS16Q9H269 839 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 PDZD7Q9H5P4 517 aa18.38■□□□□ 0.53
SNX1-203ENST00000558040 GOLGA8IPA6NC78 632 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 GOLGA8JA6NMD2 632 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 LGALS16A8MUM7 142 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 ABLIM1O14639 778 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 GPR182O15218 404 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 ENPEPQ07075 957 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 VWA3BQ502W6 1294 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 FKBP15Q5T1M5 1219 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 ZNF618Q5T7W0 954 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 FAM228AQ86W67 206 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 RDH13Q8NBN7 331 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 PAWRQ96IZ0 340 aaKnown RBP18.37■□□□□ 0.53
SNX1-203ENST00000558040 HAPLN2Q9GZV7 340 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 CDT1Q9H211 546 aa18.37■□□□□ 0.53
SNX1-203ENST00000558040 PIN4Q9Y237 131 aaKnown RBP18.37■□□□□ 0.53
SNX1-203ENST00000558040 NOC2LQ9Y3T9 749 aaKnown RBP18.37■□□□□ 0.53
SNX1-203ENST00000558040 PITPNM1O00562 1244 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 BFSP1Q12934 665 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 TRIM60Q495X7 471 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 DCAF17Q5H9S7 520 aaPredicted RBP18.36■□□□□ 0.53
SNX1-203ENST00000558040 FBXO47Q5MNV8 452 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 TCERG1LQ5VWI1 586 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 EEF1DP3Q658K8 133 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 SLC27A1Q6PCB7 646 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.36■□□□□ 0.53
SNX1-203ENST00000558040 CBWD2Q8IUF1 395 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 BORCS6Q96GS4 357 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 NAP1L5Q96NT1 182 aaPredicted RBP18.36■□□□□ 0.53
SNX1-203ENST00000558040 NDST4Q9H3R1 872 aa18.36■□□□□ 0.53
SNX1-203ENST00000558040 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
SNX1-203ENST00000558040 STX10O60499 249 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 SELPP16109 830 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 CDC25BP30305 580 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 HOXA11P31270 313 aaPredicted RBP18.35■□□□□ 0.53
SNX1-203ENST00000558040 VAMP7P51809 220 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 CYP24A1Q07973 514 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 PAK2Q13177 524 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 NR1I3Q14994 352 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 MIIPQ5JXC2 388 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 LRRC8DQ7L1W4 858 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 TMC2Q8TDI7 906 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 MFSD14AQ96MC6 490 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 CHST12Q9NRB3 414 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 RBAKQ9NYW8 714 aaPredicted RBP18.35■□□□□ 0.53
SNX1-203ENST00000558040 ST3GAL5Q9UNP4 418 aa18.35■□□□□ 0.53
SNX1-203ENST00000558040 AFPP02771 609 aaKnown RBP18.34■□□□□ 0.53
SNX1-203ENST00000558040 ADRB2P07550 413 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 GHRP10912 638 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 ACOT2P49753 483 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 POU5F1Q01860 360 aaKnown RBP18.34■□□□□ 0.53
SNX1-203ENST00000558040 UBXN1Q04323 297 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 TLE2Q04725 743 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 NFX1Q12986 1120 aaKnown RBP18.34■□□□□ 0.53
SNX1-203ENST00000558040 LPIN1Q14693 890 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 CDR2LQ86X02 465 aaPredicted RBP18.34■□□□□ 0.53
SNX1-203ENST00000558040 THNSL1Q8IYQ7 743 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 ZSWIM2Q8NEG5 633 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 TRIM6Q9C030 488 aaPredicted RBP18.34■□□□□ 0.53
SNX1-203ENST00000558040 ERVK-5Q9HDB9 667 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 ATP11BQ9Y2G3 1177 aa18.34■□□□□ 0.53
SNX1-203ENST00000558040 FAM189A1O60320 539 aa18.33■□□□□ 0.52
SNX1-203ENST00000558040 N4BP1O75113 896 aaKnown RBP18.33■□□□□ 0.52
SNX1-203ENST00000558040 PARNO95453 639 aaKnown RBP18.33■□□□□ 0.52
SNX1-203ENST00000558040 NPTXRO95502 500 aa18.33■□□□□ 0.52
SNX1-203ENST00000558040 CLTAP09496 248 aa18.33■□□□□ 0.52
SNX1-203ENST00000558040 ZSCAN20P17040 1043 aaPredicted RBP18.33■□□□□ 0.52
SNX1-203ENST00000558040 CCDC173Q0VFZ6 552 aa18.33■□□□□ 0.52
SNX1-203ENST00000558040 KCNH2Q12809 1159 aa18.33■□□□□ 0.52
SNX1-203ENST00000558040 PSMD6Q15008 389 aa18.33■□□□□ 0.52
SNX1-203ENST00000558040 SURF1Q15526 300 aa18.33■□□□□ 0.52
SNX1-203ENST00000558040 CRELD2Q6UXH1 353 aaPredicted RBP18.33■□□□□ 0.52
SNX1-203ENST00000558040 FAM43BQ6ZT52 329 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms