RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 MEA1Q16626 185 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 SLFN12LQ6IEE8 588 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 PDXDC1Q6P996 788 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 RUFY4Q6ZNE9 571 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 PLCB1Q9NQ66 1216 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.18■■□□□ 1.143e-8■■■■■ 45.9
SNRPA1-205ENST00000558036 PLAGL2Q9UPG8 496 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 PPP2R2CQ9Y2T4 447 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 ZNF233A6NK53 670 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 ACKR2O00590 384 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 TOM1L1O75674 476 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 MAP2K1Q02750 393 aaPredicted RBP22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 PRPF4BQ13523 1007 aaKnown RBP22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 KIZQ2M2Z5 673 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 CXCL17Q6UXB2 119 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 TMEM117Q9H0C3 514 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 ZNHIT6Q9NWK9 470 aaKnown RBP22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 TSKSQ9UJT2 592 aa22.18■■□□□ 1.14
SNRPA1-205ENST00000558036 TMEM132AQ24JP5 1023 aa22.17■■□□□ 1.14
SNRPA1-205ENST00000558036 LMBRD2Q68DH5 695 aaPredicted RBP22.17■■□□□ 1.14
SNRPA1-205ENST00000558036 INTS2Q9H0H0 1204 aaKnown RBP22.17■■□□□ 1.14
SNRPA1-205ENST00000558036 HDAC6Q9UBN7 1215 aa22.17■■□□□ 1.14
SNRPA1-205ENST00000558036 A0A0U1RQJ8 604 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 TREHO43280 583 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 GPC3P51654 580 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 ACRBPQ8NEB7 543 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 RAET1EQ8TD07 263 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 ZNF296Q8WUU4 475 aaPredicted RBP22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 ATRIPQ8WXE1 791 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 NFKBIZQ9BYH8 718 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 XPNPEP3Q9NQH7 507 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 ABLIM1O14639 778 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 CYP2C9P11712 490 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 TNFSF9P41273 254 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 MXI1P50539 228 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 ARID5AQ03989 594 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 RAPGEF1Q13905 1077 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 ATF7IP2Q5U623 682 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 EEF1DP3Q658K8 133 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 LMO3Q8TAP4 145 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 EDEM3Q9BZQ6 932 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 PDE11AQ9HCR9 933 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 KCND1Q9NSA2 647 aa22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 RBAKQ9NYW8 714 aaPredicted RBP22.16■■□□□ 1.14
SNRPA1-205ENST00000558036 MBLAC1A4D2B0 266 aaPredicted RBP22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 FGFR4P22455 802 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 HOXD10P28358 340 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 ADAM17P78536 824 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 DNTTIP2Q5QJE6 756 aaKnown RBP22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 C7orf31Q8N865 590 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 ELMO3Q96BJ8 720 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 KATNAL1Q9BW62 490 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 NHEJ1Q9H9Q4 299 aaPredicted RBP22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 KIAA1586Q9HCI6 787 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 ARHGAP20Q9P2F6 1191 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 FAM189A1O60320 539 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 PNMA6AP0CW24 399 aaPredicted RBP22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 HNRNPH3P31942 346 aaKnown RBP22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 ENOX2Q16206 610 aaKnown RBP22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 AMHR2Q16671 573 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 IQCEQ6IPM2 695 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 TSHZ1Q6ZSZ6 1077 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 REXO1L1PQ8IX06 675 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 TMC2Q8TDI7 906 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 CPB2Q96IY4 423 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 CDHR5Q9HBB8 845 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 ADGRG1Q9Y653 693 aa22.15■■□□□ 1.14
SNRPA1-205ENST00000558036 PTPRJQ12913 1337 aa22.14■■□□□ 1.14
SNRPA1-205ENST00000558036 ADAMTS4O75173 837 aa22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 HMGCRP04035 888 aa22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 POU5F1BQ06416 359 aa22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 ZNF568Q3ZCX4 644 aa22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 DNAJB3Q8WWF6 145 aa22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 UPF3AQ9H1J1 476 aaKnown RBP22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 SPC25Q9HBM1 224 aa22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 PTPRHQ9HD43 1115 aa22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 PRMT7Q9NVM4 692 aaPredicted RBP22.14■■□□□ 1.13
SNRPA1-205ENST00000558036 KIAA0391O15091 583 aaKnown RBP22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 ZEB2O60315 1214 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 NDUFA10O95299 355 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 PROZP22891 400 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 MCCD1P59942 119 aaPredicted RBP22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 OSTNP61366 133 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 MCL1Q07820 350 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 EPC2Q52LR7 807 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 SFMBT2Q5VUG0 894 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 PHLDB3Q6NSJ2 640 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 CEP120Q8N960 986 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 EHBP1Q8NDI1 1231 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 ZNF516Q92618 1163 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 SPAG5Q96R06 1193 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 EPN1Q9Y6I3 576 aaPredicted RBP22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 C17orf102A2RUQ5 167 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 N4BP1O75113 896 aaKnown RBP22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 LDHAP00338 332 aaKnown RBP22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 CCDC175P0C221 793 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 PSMD6Q15008 389 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 KRT39Q6A163 491 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 MPZL3Q6UWV2 235 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 SV2AQ7L0J3 742 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms