RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ADRB2P07550 413 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 RFC2P35250 354 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 PSMD6Q15008 389 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 FAM47CQ5HY64 1035 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 ENOSF1Q7L5Y1 443 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 TAS1R3Q7RTX0 852 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 APTXQ7Z2E3 356 aaKnown RBP11.44□□□□□ -0.58
GABRB3-213ENST00000557765 VSTM4Q8IW00 320 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 TTC39CQ8N584 583 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 U2AF1L4Q8WU68 220 aaKnown RBP11.44□□□□□ -0.58
GABRB3-213ENST00000557765 CACTINQ8WUQ7 758 aaKnown RBP11.44□□□□□ -0.58
GABRB3-213ENST00000557765 SLC35C1Q96A29 364 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 DEFB118Q96PH6 123 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 FDXACB1Q9BRP7 624 aaPredicted RBP11.44□□□□□ -0.58
GABRB3-213ENST00000557765 TCHPQ9BT92 498 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 MSTO1Q9BUK6 570 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 NAA15Q9BXJ9 866 aaKnown RBP11.44□□□□□ -0.58
GABRB3-213ENST00000557765 XPO4Q9C0E2 1151 aaKnown RBP11.44□□□□□ -0.58
GABRB3-213ENST00000557765 UNC93B1Q9H1C4 597 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 IFNKQ9P0W0 207 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 B4GALT4O60513 344 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 ADSSP30520 456 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 VAMP7P51809 220 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 LBX1P52954 281 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 UBXN1Q04323 297 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 DRP2Q13474 957 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 AMHR2Q16671 573 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
GABRB3-213ENST00000557765 ZNF568Q3ZCX4 644 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 CEP135Q66GS9 1140 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 KRT39Q6A163 491 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 GDF6Q6KF10 455 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-213ENST00000557765 CATSPER4Q7RTX7 472 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 WDR49Q8IV35 697 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 DRC7Q8IY82 874 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 GLIS3Q8NEA6 775 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 SH3TC2Q8TF17 1288 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 TRAPPC12Q8WVT3 735 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 DNAJB3Q8WWF6 145 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 SYN2Q92777 582 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-213ENST00000557765 LENG1Q96BZ8 264 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-213ENST00000557765 FNBP1Q96RU3 617 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 CCDC94Q9BW85 323 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-213ENST00000557765 SENP6Q9GZR1 1112 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-213ENST00000557765 DNAI2Q9GZS0 605 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 TMEM8AQ9HCN3 771 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 COQ4Q9Y3A0 265 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 C2CD2Q9Y426 696 aa11.43□□□□□ -0.58
GABRB3-213ENST00000557765 TSPAN1O60635 241 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 EFCAB14O75071 495 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 ZNF623O75123 536 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 CD4P01730 458 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 TFRCP02786 760 aaKnown RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 VTNP04004 478 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 PFKMP08237 780 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 ZSCAN20P17040 1043 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 ANXA13P27216 316 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 PBX1P40424 430 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 GRM5P41594 1212 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 KCNA1Q09470 495 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 KCNH2Q12809 1159 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 MIIPQ5JXC2 388 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 GBP6Q6ZN66 633 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 PPFIBP1Q86W92 1011 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 BRSK2Q8IWQ3 736 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 PARD3BQ8TEW8 1205 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 TRIM44Q96DX7 344 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 TARS2Q9BW92 718 aaKnown RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 FGFBP2Q9BYJ0 223 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 IMPG2Q9BZV3 1241 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 C1orf112Q9NSG2 853 aa11.42□□□□□ -0.58
GABRB3-213ENST00000557765 ZNHIT6Q9NWK9 470 aaKnown RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 CPSF3Q9UKF6 684 aaKnown RBP11.42□□□□□ -0.58
GABRB3-213ENST00000557765 GRIN2DO15399 1336 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 RPS6KA5O75582 802 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 SELPP16109 830 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 ARF4P18085 180 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-213ENST00000557765 TRIM21P19474 475 aaKnown RBP11.41□□□□□ -0.58
GABRB3-213ENST00000557765 MATR3P43243 847 aaKnown RBP eCLIP11.41□□□□□ -0.58
GABRB3-213ENST00000557765 KCNJ6P48051 423 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 CYP2J2P51589 502 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 MGAT3Q09327 533 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 EXOC3L4Q17RC7 722 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 KIZQ2M2Z5 673 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 SLC39A4Q6P5W5 647 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 NECAB2Q7Z6G3 386 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 FAM126BQ8IXS8 530 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 TXLNBQ8N3L3 684 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 DHX38Q92620 1227 aaKnown RBP11.41□□□□□ -0.58
GABRB3-213ENST00000557765 PGBD4Q96DM1 585 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 CBWD1Q9BRT8 395 aa11.41□□□□□ -0.58
GABRB3-213ENST00000557765 TRIM6Q9C030 488 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms