RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 DNAJB4Q9UDY4 337 aa18.43■□□□□ 0.54
NEK9-211ENST00000557673 FAN1Q9Y2M0 1017 aa18.43■□□□□ 0.54
NEK9-211ENST00000557673 COL4A3BPQ9Y5P4 624 aa18.43■□□□□ 0.54
NEK9-211ENST00000557673 RFC5P40937 340 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 CLCN4P51793 760 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 EMC2Q15006 297 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 PTPAQ15257 358 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 ARL6IP4Q66PJ3 421 aaKnown RBP18.42■□□□□ 0.54
NEK9-211ENST00000557673 CYP26C1Q6V0L0 522 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 OTUD6AQ7L8S5 288 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 ZNF280BQ86YH2 543 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 FLCNQ8NFG4 579 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 PSPC1Q8WXF1 523 aaKnown RBP18.42■□□□□ 0.54
NEK9-211ENST00000557673 NKD2Q969F2 451 aaPredicted RBP18.42■□□□□ 0.54
NEK9-211ENST00000557673 KLHL5Q96PQ7 755 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 RTP3Q9BQQ7 232 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 IGSF9Q9P2J2 1179 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 FBXL21Q9UKT6 434 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 CLIC4Q9Y696 253 aa18.42■□□□□ 0.54
NEK9-211ENST00000557673 RIF1Q5UIP0 2472 aaKnown RBP18.42■□□□□ 0.54
NEK9-211ENST00000557673 PRR23AA6NEV1 266 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 MEIS3P2A8K0S8 358 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 ASAP2O43150 1006 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 GAS2O43903 313 aaKnown RBP18.41■□□□□ 0.54
NEK9-211ENST00000557673 CNPP09543 421 aaKnown RBP18.41■□□□□ 0.54
NEK9-211ENST00000557673 PCBP1Q15365 356 aaKnown RBP eCLIP18.41■□□□□ 0.54
NEK9-211ENST00000557673 IL17AQ16552 155 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 AGMOQ6ZNB7 445 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 ASCL5Q7RTU5 278 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 IGSF22Q8N9C0 903 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 PRPF31Q8WWY3 499 aaKnown RBP18.41■□□□□ 0.54
NEK9-211ENST00000557673 VN1R3Q9BXE9 311 aa18.41■□□□□ 0.54
NEK9-211ENST00000557673 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
NEK9-211ENST00000557673 MORC2Q9Y6X9 1032 aaPredicted RBP18.41■□□□□ 0.54
NEK9-211ENST00000557673 A0A087WWV3 80 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 NR1I2O75469 434 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 LYPLA2O95372 231 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 SSBP05455 408 aaKnown RBP eCLIP18.4■□□□□ 0.54
NEK9-211ENST00000557673 URODP06132 367 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 ADH1AP07327 375 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 SRGAP2CP0DJJ0 459 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 AOC1P19801 751 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 NASPP49321 788 aaPredicted RBP18.4■□□□□ 0.54
NEK9-211ENST00000557673 NCBP1Q09161 790 aaKnown RBP18.4■□□□□ 0.54
NEK9-211ENST00000557673 CMASQ8NFW8 434 aaPredicted RBP18.4■□□□□ 0.54
NEK9-211ENST00000557673 TCP11Q8WWU5 503 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 STAMQ92783 540 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 KCNK12Q9HB15 430 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 XPNPEP1Q9NQW7 623 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 DUSP12Q9UNI6 340 aa18.4■□□□□ 0.54
NEK9-211ENST00000557673 NRP1O14786 923 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 LILRB3O75022 631 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 DDHD2O94830 711 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 SOD2P04179 222 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 DTHD1Q6ZMT9 781 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 PIGOQ8TEQ8 1089 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 ZNF396Q96N95 335 aaPredicted RBP18.39■□□□□ 0.53
NEK9-211ENST00000557673 MTRQ99707 1265 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 RHOBTB2Q9BYZ6 727 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 RAB34Q9BZG1 259 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 ANKEF1Q9NU02 776 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.53
NEK9-211ENST00000557673 MYO15AQ9UKN7 3530 aa18.39■□□□□ 0.53
NEK9-211ENST00000557673 VWA3AA6NCI4 1184 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 ERLIN2O94905 339 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 SPATA31C1P0DKV0 1188 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 ITGA4P13612 1032 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
NEK9-211ENST00000557673 AXLP30530 894 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 HOXA11P31270 313 aaPredicted RBP18.38■□□□□ 0.53
NEK9-211ENST00000557673 NUCB2P80303 420 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 CEBPZQ03701 1054 aaKnown RBP18.38■□□□□ 0.53
NEK9-211ENST00000557673 FOXD4L6Q3SYB3 417 aaPredicted RBP18.38■□□□□ 0.53
NEK9-211ENST00000557673 HAUS3Q68CZ6 603 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 FOXD4L3Q6VB84 417 aaPredicted RBP18.38■□□□□ 0.53
NEK9-211ENST00000557673 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 ERMNQ8TAM6 284 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 CCDC43Q96MW1 224 aaKnown RBP18.38■□□□□ 0.53
NEK9-211ENST00000557673 RPS6KC1Q96S38 1066 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 MINDY3Q9H8M7 445 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 LRWD1Q9UFC0 647 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 FAM186AA6NE01 2351 aa18.38■□□□□ 0.53
NEK9-211ENST00000557673 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 PP2D1A8MPX8 630 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 C2CD2LO14523 706 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 B4GALT3O60512 393 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 MED24O75448 989 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 YEATS4O95619 227 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 C1RP00736 705 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 POMCP01189 267 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 RARRES1P49788 294 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 PDIA5Q14554 519 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 CWF19L1Q69YN2 538 aaKnown RBP18.37■□□□□ 0.53
NEK9-211ENST00000557673 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 CATSPER3Q86XQ3 398 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 CCDC105Q8IYK2 499 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 SIX5Q8N196 739 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms