RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ATP2A2P16615 1042 aaKnown RBP15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 CASP5P51878 434 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 SHHQ15465 462 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 CAMK4Q16566 473 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 UBXN11Q5T124 520 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 DHTKD1Q96HY7 919 aaPredicted RBP15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 CPB2Q96IY4 423 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 TOPORSQ9NS56 1045 aaPredicted RBP15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 DACH1Q9UI36 760 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 MAN1B1Q9UKM7 699 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 GIT1Q9Y2X7 761 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 ANK1P16157 1881 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 MYO9BQ13459 2157 aa15.43■□□□□ 0.06
SUPT16H-208ENST00000557652 A0A0B4J269 797 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 PSMA7O14818 248 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 OGTO15294 1046 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 CALUO43852 315 aaPredicted RBP15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 GJB5O95377 273 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 GRM5P41594 1212 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 TCTN1Q2MV58 587 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 EDRF1Q3B7T1 1238 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 SLC9A9Q8IVB4 645 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 CD302Q8IX05 232 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 MLKLQ8NB16 471 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 MRPL9Q9BYD2 267 aaKnown RBP15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 CDT1Q9H211 546 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 KANSL3Q9P2N6 904 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 TRAF3IP3Q9Y228 551 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 IPPQ9Y573 584 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 INSL6Q9Y581 213 aa15.42■□□□□ 0.06
SUPT16H-208ENST00000557652 BICDL2A1A5D9 508 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 NPTXRO95502 500 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 EDN1P05305 212 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 CLTAP09496 248 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 ITGA4P13612 1032 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 RPL13P26373 211 aaKnown RBP15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 MATR3P43243 847 aaKnown RBP eCLIP15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 YARSP54577 528 aaKnown RBP15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 HTRA4P83105 476 aaPredicted RBP15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 LRRC63Q05C16 580 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 LRIT3Q3SXY7 679 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 C9orf50Q5SZB4 431 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 GLB1LQ6UWU2 654 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 HERC6Q8IVU3 1022 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 ADSSL1Q8N142 457 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 POMGNT1Q8WZA1 660 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 HPS3Q969F9 1004 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 RAD9AQ99638 391 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 TSG101Q99816 390 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 MSTO1Q9BUK6 570 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 TMEM117Q9H0C3 514 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 KCTD10Q9H3F6 313 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 PLEKHA5Q9HAU0 1116 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 CXXC1Q9P0U4 656 aaPredicted RBP15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 ANKFY1Q9P2R3 1169 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 NLRC5Q86WI3 1866 aa15.41■□□□□ 0.06
SUPT16H-208ENST00000557652 TTLL13PA6NNM8 815 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 MAPK13O15264 365 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 DGKIO75912 1065 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 ATF7P17544 494 aaPredicted RBP15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 HOXD13P35453 343 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 SMAD3P84022 425 aaKnown RBP15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 ENPEPQ07075 957 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 NFKBIBQ15653 356 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 RAB30Q15771 203 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 EEF1DP3Q658K8 133 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 CENPPQ6IPU0 288 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 ARMCX5Q6P1M9 558 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 SLC39A4Q6P5W5 647 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.4■□□□□ 0.062e-6■■■■■ 46.3
SUPT16H-208ENST00000557652 CMTR2Q8IYT2 770 aaKnown RBP15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 ABI1Q8IZP0 508 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 ACAP3Q96P50 834 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 FGFBP2Q9BYJ0 223 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 RSAD1Q9HA92 442 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 AGPAT3Q9NRZ7 376 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 AGO2Q9UKV8 859 aaKnown RBP15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 GDAQ9Y2T3 454 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 PCDHA11Q9Y5I1 949 aa15.4■□□□□ 0.06
SUPT16H-208ENST00000557652 TGFB1I1O43294 461 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 EXTL3O43909 919 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 ADRB2P07550 413 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 PRCPP42785 496 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 NLRP12P59046 1061 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 DEFB103AP81534 67 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 KCNA1Q09470 495 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 SURF1Q15526 300 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 SASS6Q6UVJ0 657 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 NT5DC4Q86YG4 428 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 GLIS3Q8NEA6 775 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 ZNF689Q96CS4 500 aaPredicted RBP15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 FBXL18Q96ME1 805 aa15.39■□□□□ 0.05
SUPT16H-208ENST00000557652 ZBED2Q9BTP6 218 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms