RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
APEX1-219ENST00000557365 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
APEX1-219ENST00000557365 MAGEC2Q9UBF1 373 aaPredicted RBP13.09□□□□□ -0.31
APEX1-219ENST00000557365 PADI3Q9ULW8 664 aa13.09□□□□□ -0.31
APEX1-219ENST00000557365 ATP11BQ9Y2G3 1177 aa13.09□□□□□ -0.31
APEX1-219ENST00000557365 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 KCNJ18B7U540 433 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 CSDE1O75534 798 aaKnown RBP13.08□□□□□ -0.32
APEX1-219ENST00000557365 AKAP3O75969 853 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 ADRB2P07550 413 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 EPB41P11171 864 aaKnown RBP13.08□□□□□ -0.32
APEX1-219ENST00000557365 CYP2J2P51589 502 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 PAK2Q13177 524 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 KCNJ12Q14500 433 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 DSC3Q14574 896 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 EEF1DP3Q658K8 133 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 INTS8Q75QN2 995 aaKnown RBP13.08□□□□□ -0.32
APEX1-219ENST00000557365 USP37Q86T82 979 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 TRIM59Q8IWR1 403 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 APBB2Q92870 758 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 ABHD8Q96I13 439 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 ZBTB45Q96K62 511 aaPredicted RBP13.08□□□□□ -0.32
APEX1-219ENST00000557365 TCHPQ9BT92 498 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 MSTO1Q9BUK6 570 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 CDT1Q9H211 546 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 IKZF4Q9H2S9 585 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 AGO3Q9H9G7 860 aaKnown RBP13.08□□□□□ -0.32
APEX1-219ENST00000557365 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 ARMCX3Q9UH62 379 aaPredicted RBP13.08□□□□□ -0.32
APEX1-219ENST00000557365 CITO14578 2027 aa13.08□□□□□ -0.32
APEX1-219ENST00000557365 ALPK3Q96L96 1907 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 TISP43B9A030 160 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 ZNF623O75123 536 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 CLTAP09496 248 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 SKIP12755 728 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 GRM5P41594 1212 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 CASP4P49662 377 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 RAB27AP51159 221 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 SURF1Q15526 300 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 SNRNP35Q16560 246 aaKnown RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 ZNF568Q3ZCX4 644 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 COL13A1Q5TAT6 717 aaPredicted RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 APTXQ7Z2E3 356 aaKnown RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 CNOT6LQ96LI5 555 aaKnown RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
APEX1-219ENST00000557365 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
APEX1-219ENST00000557365 PMM2O15305 246 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 TIMP1P01033 207 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 GHRP10912 638 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 FGFR4P22455 802 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 CD52P31358 61 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
APEX1-219ENST00000557365 CLDN10P78369 228 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 NFX1Q12986 1120 aaKnown RBP13.06□□□□□ -0.32
APEX1-219ENST00000557365 GPNMBQ14956 572 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 MAN2A1Q16706 1144 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 UBXN11Q5T124 520 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 CEP135Q66GS9 1140 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 MRPL10Q7Z7H8 261 aaKnown RBP13.06□□□□□ -0.32
APEX1-219ENST00000557365 BRSK2Q8IWQ3 736 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 CD302Q8IX05 232 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 TUBGCP2Q9BSJ2 902 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 HTATIP2Q9BUP3 242 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 IFIH1Q9BYX4 1025 aaKnown RBP13.06□□□□□ -0.32
APEX1-219ENST00000557365 PCIF1Q9H4Z3 704 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 PLEKHA5Q9HAU0 1116 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
APEX1-219ENST00000557365 ANKFY1Q9P2R3 1169 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
APEX1-219ENST00000557365 USP20Q9Y2K6 914 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
APEX1-219ENST00000557365 ANK1P16157 1881 aa13.06□□□□□ -0.32
APEX1-219ENST00000557365 A0A1B0GTH6 734 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 CBFA2T2O43439 604 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 STX10O60499 249 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 NBNO60934 754 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 IL18RAPO95256 599 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 TPM2P07951 284 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 PFKMP08237 780 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 KRT13P13646 458 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 GTF2H1P32780 548 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 MTIF2P46199 727 aaKnown RBP13.05□□□□□ -0.32
APEX1-219ENST00000557365 FAM189BP81408 668 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 FANCCQ00597 558 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 CYP24A1Q07973 514 aa13.05□□□□□ -0.32
APEX1-219ENST00000557365 BFSP1Q12934 665 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms