RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TSPY8P0CW00 308 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TXNP10599 105 aaKnown RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 CKBP12277 381 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TFE3P19532 575 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 CASTP20810 708 aaKnown RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 LTBRP36941 435 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TXKP42681 527 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 MRPL12P52815 198 aaKnown RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 CHMP4BP1P59074 171 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TFAP4Q01664 338 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 FAM160A1Q05DH4 1040 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TCF15Q12870 199 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 PPP2R5BQ15173 497 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 SMAD2Q15796 467 aaKnown RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TSNAXIP1Q2TAA8 658 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TCEAL5Q5H9L2 206 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 SNAP47Q5SQN1 464 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TP53INP2Q8IXH6 220 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TMEM192Q8IY95 271 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 PPP1R13LQ8WUF5 828 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 CTAGE1Q96RT6 745 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 HAUS7Q99871 368 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 CLDND1Q9NY35 253 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 MUTYHQ9UIF7 546 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 PNMA2Q9UL42 364 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 CCPG1Q9ULG6 757 aa5.68□□□□□ -1.5
ATXN3-247ENST00000557311 TPX2Q9ULW0 747 aaKnown RBP5.68□□□□□ -1.5
ATXN3-247ENST00000557311 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 STXBP3O00186 592 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 MBTPS2O43462 519 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 RAB11FIP3O75154 756 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 CHGBP05060 677 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 RB1P06400 928 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 TPM2P07951 284 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 SLC3A2P08195 630 aaKnown RBP5.67□□□□□ -1.5
ATXN3-247ENST00000557311 GNAT2P19087 354 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 CALML3P27482 149 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 SNAP25P60880 206 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 PDE4BQ07343 736 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 PWP1Q13610 501 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 TCTN1Q2MV58 587 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 UTP14CQ5TAP6 766 aaKnown RBP5.67□□□□□ -1.5
ATXN3-247ENST00000557311 SEZ6L2Q6UXD5 910 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-247ENST00000557311 RNF207Q6ZRF8 634 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 ARMCX6Q7L4S7 300 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 DTX1Q86Y01 620 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 ITPRIPQ8IWB1 547 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 FLCNQ8NFG4 579 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 DBF4BQ8NFT6 615 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 DNERQ8NFT8 737 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 DHX38Q92620 1227 aaKnown RBP5.67□□□□□ -1.5
ATXN3-247ENST00000557311 KAT2BQ92831 832 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 ATOH1Q92858 354 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-247ENST00000557311 COPS5Q92905 334 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 GATA6Q92908 595 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 GAL3ST3Q96A11 431 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 DUSP23Q9BVJ7 150 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 LMAN2LQ9H0V9 348 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 TMEM51Q9NW97 253 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 CHD7Q9P2D1 2997 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 ZC3H7BQ9UGR2 993 aaKnown RBP5.67□□□□□ -1.5
ATXN3-247ENST00000557311 GTF2IRD1Q9UHL9 959 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 GGT7Q9UJ14 662 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 EMSYQ7Z589 1322 aa5.67□□□□□ -1.5
ATXN3-247ENST00000557311 LRRC37A2A6NM11 1700 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 HMMRO75330 724 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 GH1P01241 217 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 PF4P02776 101 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 PGRP06401 933 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 EDNRBP24530 442 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 TDO2P48775 406 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 ZXDAP98168 799 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
ATXN3-247ENST00000557311 CAMK2GQ13555 558 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-247ENST00000557311 DGKDQ16760 1214 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 TRIM71Q2Q1W2 868 aaKnown RBP5.66□□□□□ -1.5
ATXN3-247ENST00000557311 DNTTIP2Q5QJE6 756 aaKnown RBP5.66□□□□□ -1.5
ATXN3-247ENST00000557311 ZNF618Q5T7W0 954 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 CCDC62Q6P9F0 684 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 ERMP1Q7Z2K6 904 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 UBE3DQ7Z6J8 389 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 RPAINQ86UA6 219 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 HID1Q8IV36 788 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 MYOCDQ8IZQ8 938 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 TMEM87AQ8NBN3 555 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 PHC3Q8NDX5 983 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 AFG1LQ8WV93 481 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 TOP1MTQ969P6 601 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 CHMP4CQ96CF2 233 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 YME1L1Q96TA2 773 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 MIPEPQ99797 713 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 KATNAL1Q9BW62 490 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 NACAP1Q9BZK3 213 aa5.66□□□□□ -1.5
ATXN3-247ENST00000557311 WNT10AQ9GZT5 417 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms